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L1_007_000M1_scaffold_274

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_274_1
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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2..1087
DNA (1086bp) protein (362aa)
Efflux ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XMS4_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDA13879.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
efflux ABC transporter permease
L1_007_000M1_scaffold_274_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1608..3056
DNA (1449bp) protein (483aa)
Lysine decarboxylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V313_9FIRM
Lysine decarboxylase {ECO:0000313|EMBL:CCZ77781.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
lysine decarboxylase
L1_007_000M1_scaffold_274_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3078..3935
DNA (858bp) protein (286aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIB1_9FIRM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_274_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3961..5256
DNA (1296bp) protein (432aa)
Saccharopine dehydrogenase and related proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPR8_9FIRM
Saccharopine dehydrogenase and related proteins {ECO:0000313|EMBL:CCZ77779.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_274_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5273..6424
DNA (1152bp) protein (384aa)
Carboxynorspermidine decarboxylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHN6_9FIRM
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CCZ77778.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carboxynorspermidine decarboxylase
L1_007_000M1_scaffold_274_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6396..7550
DNA (1155bp) protein (385aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
agmatine deiminase (EC:3.5.3.12)
Putative agmatine deiminase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAN5_9FIRM
L1_007_000M1_scaffold_274_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7552..8424
DNA (873bp) protein (291aa)
Carbon-nitrogen hydrolase family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V308_9FIRM
Carbon-nitrogen hydrolase family protein {ECO:0000313|EMBL:CCZ77776.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbon-nitrogen hydrolase family protein
L1_007_000M1_scaffold_274_8
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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8503..9354
DNA (852bp) protein (284aa)
Conserved repeat domain n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N2M1_9FIRM
Conserved repeat domain {ECO:0000313|EMBL:CDF06343.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
conserved repeat domain
L1_007_000M1_scaffold_274_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9533..9706
DNA (174bp) protein (58aa)
HD domain-containing protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHN2_9FIRM
HD domain-containing protein {ECO:0000313|EMBL:CCZ77773.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_274_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9703..10755
DNA (1053bp) protein (351aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAN1_9FIRM
L1_007_000M1_scaffold_274_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10786..11430)
DNA (645bp) protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Roseburia sp. CAG:18 RepID=R5V302_9FIRM
L1_007_000M1_scaffold_274_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11811..12746
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77770.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_274_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12839..14566
DNA (1728bp) protein (576aa)
alpha-phosphoglucomutase (EC:5.4.2.2 5.4.2.8)
Alpha-phosphoglucomutase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPQ6_9FIRM
Alpha-phosphoglucomutase {ECO:0000313|EMBL:CCZ77769.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_274_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14572..15309
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77768.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_274_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15311..17509
DNA (2199bp) protein (733aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAM8_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CCZ77767.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_274_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17603..18622
DNA (1020bp) protein (340aa)
Transcriptional regulators n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2Z7_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CCZ77766.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators
L1_007_000M1_scaffold_274_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18597..19514)
DNA (918bp) protein (306aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI99_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ77765.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000M1_scaffold_274_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19796..21199
DNA (1404bp) protein (468aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPQ2_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ77764.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_274_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21298..22323
DNA (1026bp) protein (342aa)
Putative ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHM2_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCZ77763.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_274_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22323..23198
DNA (876bp) protein (292aa)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAM4_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ77762.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_000M1_scaffold_274_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23226..24401
DNA (1176bp) protein (392aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Cellobiose 2-epimerase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2Z1_9FIRM
N-acyl-D-glucosamine 2-epimerase
L1_007_000M1_scaffold_274_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24405..25577
DNA (1173bp) protein (391aa)
4-O-beta-D-mannosyl-D-glucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928}; Short=MGP {ECO:0000256|HAMAP-Rule:MF_00928};; Short=Mannosylglucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928};; EC=2.4.1.281 {ECO:0000256|HAMAP-Rule:MF_00928};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
4-O-beta-D-mannosyl-D-glucose phosphorylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI93_9FIRM
Predicted glycosylase
L1_007_000M1_scaffold_274_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25592..26617
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77759.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycosidase-like protein
L1_007_000M1_scaffold_274_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26620..27669
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77758.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_274_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27672..28778
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77757.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Lysophospholipase L1 and related esterases
L1_007_000M1_scaffold_274_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28795..31107
DNA (2313bp) protein (771aa)
Mannose-6-phosphate isomerase class I/beta-galactosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2Y5_9FIRM
Mannose-6-phosphate isomerase class I/beta-galactosidase {ECO:0000313|EMBL:CCZ77756.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
mannose-6-phosphate isomerase, class I/beta-galactosidase
L1_007_000M1_scaffold_274_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31264..32247
DNA (984bp) protein (328aa)
LacI family transcription regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI90_9FIRM
LacI family transcription regulator {ECO:0000313|EMBL:CCZ77755.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LacI family transcription regulator
L1_007_000M1_scaffold_274_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32449..33102
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77754.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_274_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33105..34178
DNA (1074bp) protein (358aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Arabinogalactan endo-1 4-beta-galactosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHL3_9FIRM
arabinogalactan endo-1,4-beta-galactosidase
L1_007_000M1_scaffold_274_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34194..35411
DNA (1218bp) protein (406aa)
Extracellular solute-binding protein family 1 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAM0_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCZ77752.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
family 1 extracellular solute-binding protein
Displaying items 1-30 of 61 in total

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