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L1_007_000M1_scaffold_300

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_300_31
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33592..34251)
DNA (660bp) protein (220aa)
Response regulator receiver domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMC9_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ79438.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
two component transcriptional regulator
L1_007_000M1_scaffold_300_32
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34244..34966)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79437.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
antibiotic ABC transporter
L1_007_000M1_scaffold_300_33
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34963..35727)
DNA (765bp) protein (255aa)
Lantibiotic protection ABC transporter permease subunit MutE/EpiE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7K8_9FIRM
Lantibiotic protection ABC transporter permease subunit MutE/EpiE family {ECO:0000313|EMBL:CCZ79436.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transporter protein
L1_007_000M1_scaffold_300_34
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35724..36428)
DNA (705bp) protein (235aa)
lantibiotic protection ABC transporter, ATP-binding subunit (EC:3.6.3.25)
Lantibiotic protection ABC transporter ATP-binding subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMW2_9FIRM
Lantibiotic protection ABC transporter ATP-binding subunit {ECO:0000313|EMBL:CCZ79435.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_300_35
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36514..36753)
DNA (240bp) protein (80aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B159_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EMZ35297.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L1_007_000M1_scaffold_300_36
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37635..38240)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z4Z9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA29156.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
hypothetical protein
L1_007_000M1_scaffold_300_37
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38257..38667)
DNA (411bp) protein (137aa)
Peptide deformylase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z755_9FIRM
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
peptide deformylase
L1_007_000M1_scaffold_300_38
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(39074..40420)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21503.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
putative AAA+ superfamily ATPase
L1_007_000M1_scaffold_300_39
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40721..41344)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5A6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38285.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_007_000M1_scaffold_300_40
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41341..41949)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y1S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL01626.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L1_007_000M1_scaffold_300_41
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42083..43015)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G5T7_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24728.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_000M1_scaffold_300_42
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43101..43880)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77888.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_43
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43877..44305)
DNA (429bp) protein (143aa)
Transcriptional regulator MerR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAZ1_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCZ77887.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator, MerR family
L1_007_000M1_scaffold_300_44
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44590..45225)
DNA (636bp) protein (212aa)
Uncharacterised ACR YkgG family COG1556 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3B5_9FIRM
Uncharacterised ACR YkgG family COG1556 {ECO:0000313|EMBL:CCZ77886.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterised ACR, YkgG family COG1556.
L1_007_000M1_scaffold_300_45
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45250..45423)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77885.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_46
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45456..46310)
DNA (855bp) protein (285aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ28_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCZ77884.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
N-acetylmuramoyl-L-alanine amidase domain protein
L1_007_000M1_scaffold_300_47
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46491..47033
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77883.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_48
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47127..50168)
DNA (3042bp) protein (1014aa)
Putative efflux ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAY5_9FIRM
Putative efflux ABC transporter permease protein {ECO:0000313|EMBL:CCZ77882.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type transport system, involved in lipoprotein release, permease component
L1_007_000M1_scaffold_300_49
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50179..50895)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77881.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_007_000M1_scaffold_300_50
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51077..51703)
DNA (627bp) protein (209aa)
Transcriptional regulator TetR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIK9_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCZ77880.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulator
L1_007_000M1_scaffold_300_51
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51800..52801)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77879.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted Na+-dependent transporter
L1_007_000M1_scaffold_300_52
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53275..54120)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77878.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_53
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54327..57365)
DNA (3039bp) protein (1013aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77877.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF2726).
L1_007_000M1_scaffold_300_54
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57444..57668)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77876.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_300_55
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(57665..58012)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BMI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66338.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L1_007_000M1_scaffold_300_56
Paenibacillus wynnii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(58025..58909)
DNA (885bp) protein (295aa)
AraC family transcriptional regulator n=1 Tax=Streptococcus massiliensis RepID=UPI00034C56B6
Uncharacterized protein {ECO:0000313|EMBL:KGE18780.1}; TaxID=268407 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus wynnii.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_300_57
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

59108..61123
DNA (2016bp) protein (672aa)
Glycosyl hydrolase family 31 n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N383_9FIRM
Glycosyl hydrolase family 31 {ECO:0000313|EMBL:CDF07255.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
glycoside hydrolase
L1_007_000M1_scaffold_300_58
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61151..62542
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78877.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_59
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

62552..63409
DNA (858bp) protein (286aa)
Permease component of ABC-type sugar transporter n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CHR4_9FIRM
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:CCX67273.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
permease of ABC transporter possibly for oligosaccharides
L1_007_000M1_scaffold_300_60
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63409..64320
DNA (912bp) protein (304aa)
Permease of ABC transporter possibly for oligosaccharides n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULE9_9FIRM
Permease of ABC transporter possibly for oligosaccharides {ECO:0000313|EMBL:CCZ78875.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Displaying items 31-60 of 63 in total

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