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L1_007_000M1_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_300_1
unknown

Not on your lists

2..178
DNA (177bp) protein (59aa)

This feature has no annotations

L1_007_000M1_scaffold_300_2
unknown

Not on your lists

comp(1120..1536)
DNA (417bp) protein (139aa)

This feature has no annotations

L1_007_000M1_scaffold_300_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1503..2861)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78021.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2874..3359)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78022.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3356..3565)
DNA (210bp) protein (70aa)
Transcriptional regulator XRE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIF6_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCZ78023.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
XRE family transcriptional regulator
L1_007_000M1_scaffold_300_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3753..4850
DNA (1098bp) protein (366aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
3-dehydroquinate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQK4_9FIRM
3-dehydroquinate synthase {ECO:0000313|EMBL:CCZ78024.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_300_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4851..6038
DNA (1188bp) protein (396aa)
Uncharacterized membrane protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ58_9FIRM
Uncharacterized membrane protein {ECO:0000313|EMBL:CCZ78025.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized membrane protein
L1_007_000M1_scaffold_300_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6130..6942
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78026.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_300_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6995..7468)
DNA (474bp) protein (158aa)
Uncharacterized conserved protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBF8_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCZ78027.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7465..8334)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78028.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8356..9645)
DNA (1290bp) protein (430aa)
Uncharacterized conserved protein related to MYG1 family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQK8_9FIRM
Uncharacterized conserved protein related to MYG1 family {ECO:0000313|EMBL:CCZ78029.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized conserved protein related to MYG1 family
L1_007_000M1_scaffold_300_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10356..11312)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79463.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11493..13073)
DNA (1581bp) protein (527aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7N6_9FIRM
L1_007_000M1_scaffold_300_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13253..14341
DNA (1089bp) protein (363aa)
Signaling protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMY9_9FIRM
Signaling protein {ECO:0000313|EMBL:CCZ79455.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
signaling protein
L1_007_000M1_scaffold_300_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14344..15405)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79454.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_300_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15546..16106)
DNA (561bp) protein (187aa)
Putative flavoredoxin n=1 Tax=Roseburia sp. CAG:18 RepID=R5UME5_9FIRM
Putative flavoredoxin {ECO:0000313|EMBL:CCZ79453.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flavoredoxin
L1_007_000M1_scaffold_300_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16666..17877)
DNA (1212bp) protein (404aa)
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFF5_9FIRM
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components {ECO:0000313|EMBL:CCZ79452.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferric enterobactin transport ATP-binding protein fepC
L1_007_000M1_scaffold_300_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17970..19022)
DNA (1053bp) protein (351aa)
ABC-type Fe3+-siderophore transport system permease component n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7M9_9FIRM
ABC-type Fe3+-siderophore transport system permease component {ECO:0000313|EMBL:CCZ79451.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type Fe3+-siderophore transport system, permease component
L1_007_000M1_scaffold_300_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19081..20580)
DNA (1500bp) protein (500aa)
Putative ferrichrome-binding periplasmic protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMY2_9FIRM
Putative ferrichrome-binding periplasmic protein {ECO:0000313|EMBL:CCZ79450.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L1_007_000M1_scaffold_300_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20709..22364)
DNA (1656bp) protein (552aa)
Heme-binding protein FetB n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUQ6_9FIRM
Heme-binding protein FetB {ECO:0000313|EMBL:CCZ79449.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Cobalamin biosynthesis protein CbiK, Co2+ chelatase
L1_007_000M1_scaffold_300_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23142..24107)
DNA (966bp) protein (322aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Sugar kinases ribokinase family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMD9_9FIRM
Sugar kinases ribokinase family {ECO:0000313|EMBL:CCZ79448.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_300_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24123..25007)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79447.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar phosphate isomerase/epimerase
L1_007_000M1_scaffold_300_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25025..26023)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79446.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
L1_007_000M1_scaffold_300_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26026..27036)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79445.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
L1_007_000M1_scaffold_300_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27052..28539)
DNA (1488bp) protein (496aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79444.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_300_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28695..29792)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79443.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type sugar transport system, periplasmic component
L1_007_000M1_scaffold_300_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29815..30387)
DNA (573bp) protein (191aa)
3-hexulose-6-phosphate isomerase (EC:5.3.-.-)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79442.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_300_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30389..30862)
DNA (474bp) protein (158aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79441.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_300_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30965..31903)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79440.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators
L1_007_000M1_scaffold_300_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32210..33601)
DNA (1392bp) protein (464aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUP7_9FIRM
subtilin biosynthesis sensor protein spaK
Displaying items 1-30 of 63 in total

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