ggKbase home page

L1_007_000M1_scaffold_303

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_303_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(205..2292)
DNA (2088bp) protein (696aa)
Peptidase family M3 {ECO:0000313|EMBL:EDM21686.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDM21686.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidase family M3 n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZAZ7_9BACE
peptidyl-dipeptidase
L1_007_000M1_scaffold_303_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2321..3427)
DNA (1107bp) protein (369aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bacteroides caccae RepID=A5ZB39_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19102.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Exonuclease III
L1_007_000M1_scaffold_303_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3411..4316)
DNA (906bp) protein (302aa)
Peptidase, S54 family n=2 Tax=Bacteroides caccae RepID=A5ZB40_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19101.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L1_007_000M1_scaffold_303_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4297..4977)
DNA (681bp) protein (227aa)
Peptidase, S54 family {ECO:0000313|EMBL:EDM21689.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDM21689.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidase, S54 family n=2 Tax=Bacteroides caccae RepID=A5ZB41_9BACE
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L1_007_000M1_scaffold_303_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5196..5468
DNA (273bp) protein (91aa)
DNA-binding protein HU n=3 Tax=Bacteroides RepID=A5ZB42_9BACE
DNA-binding protein HU {ECO:0000313|EMBL:EDM21690.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
bacterial nucleoid protein Hbs
L1_007_000M1_scaffold_303_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


5553..7370
DNA (1818bp) protein (606aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=3 Tax=Bacteroides RepID=A5ZB43_9BACE
L1_007_000M1_scaffold_303_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7600..9609)
DNA (2010bp) protein (670aa)
Conserved domain protein n=3 Tax=root RepID=A5ZB44_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM21692.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_000M1_scaffold_303_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9678..12023)
DNA (2346bp) protein (782aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=2 Tax=Bacteroides caccae RepID=A5ZB45_9BACE
L1_007_000M1_scaffold_303_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12717..13268
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U6C9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73643.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_007_000M1_scaffold_303_10
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13423..14703)
DNA (1281bp) protein (427aa)
chitinase n=1 Tax=Bacteroides faecis RepID=UPI000262F92E
Uncharacterized protein {ECO:0000313|EMBL:CDE79968.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
chitinase
L1_007_000M1_scaffold_303_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14730..16169)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A054_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY80752.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000M1_scaffold_303_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16216..17691)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UF20_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY80753.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000M1_scaffold_303_13
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17736..19421)
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00036A5558
SusD family protein {ECO:0000313|EMBL:ERI86399.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
hypothetical protein
L1_007_000M1_scaffold_303_14
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19443..22229)
DNA (2787bp) protein (929aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IJM3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EES69505.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L1_007_000M1_scaffold_303_15
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22262..24013)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IJM4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES69506.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L1_007_000M1_scaffold_303_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24027..27206)
DNA (3180bp) protein (1060aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A059_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY80757.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000M1_scaffold_303_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27361..28818)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=K1G3T3_BACFG
Sulfatase {ECO:0000313|EMBL:KER49887.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
putative sulfatase
L1_007_000M1_scaffold_303_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29033..30655
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UBJ9_BACVU
His Kinase A domain protein {ECO:0000313|EMBL:EXZ45981.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
histidine kinase
L1_007_000M1_scaffold_303_19
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30809..33154
DNA (2346bp) protein (782aa)
Two-component system sensor histidine kinase/response regulator n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5RSW9_9BACE
Two-component system sensor histidine kinase/response regulator {ECO:0000313|EMBL:CCZ37886.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
two-component system sensor histidine kinase/response regulator hybrid
L1_007_000M1_scaffold_303_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33254..34978)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZB32_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19006.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_000M1_scaffold_303_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35001..38018)
DNA (3018bp) protein (1006aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides caccae RepID=A5ZB33_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19005.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_000M1_scaffold_303_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38151..38672)
DNA (522bp) protein (174aa)
Hydrolase, NUDIX family n=3 Tax=Bacteroides RepID=A5ZB34_9BACE
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDM21705.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ADP-ribose pyrophosphatase
L1_007_000M1_scaffold_303_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38806..40275)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZB36_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19003.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_000M1_scaffold_303_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40309..41895)
DNA (1587bp) protein (529aa)
Glycosyl hydrolase, family 31 n=2 Tax=Bacteroides caccae RepID=A5ZB37_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19002.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
glycoside hydrolase
L1_007_000M1_scaffold_303_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41915..46045)
DNA (4131bp) protein (1377aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides caccae RepID=A5ZB38_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19001.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
histidine kinase
L1_007_000M1_scaffold_303_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46064..47167)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZAY6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19000.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative lipoprotein
L1_007_000M1_scaffold_303_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47198..48991)
DNA (1794bp) protein (598aa)
SusD family protein n=2 Tax=Bacteroides caccae RepID=A5ZAY7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18999.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
SusD family protein
L1_007_000M1_scaffold_303_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49010..52045)
DNA (3036bp) protein (1012aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides caccae RepID=A5ZAY8_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21712.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
TonB-linked outer membrane protein SusC/RagA family
L1_007_000M1_scaffold_303_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52935..53501
DNA (567bp) protein (189aa)
Peroxiredoxin {ECO:0000313|EMBL:EDM21713.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDM21713.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=3 Tax=Bacteroides RepID=A5ZAY9_9BACE
L1_007_000M1_scaffold_303_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53590..55140
DNA (1551bp) protein (517aa)
Alkyl hydroperoxide reductase F subunit n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U6K5_9BACE
Alkyl hydroperoxide reductase F subunit {ECO:0000313|EMBL:CCZ73655.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
alkyl hydroperoxide reductase, F subunit
Displaying items 1-30 of 44 in total

View Taxonomy