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L1_007_000M1_scaffold_305

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_305_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..746)
DNA (744bp) protein (248aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CN12_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:EDY33358.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L1_007_000M1_scaffold_305_2
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(896..1618)
DNA (723bp) protein (241aa)
Histidinol phosphatase and related hydrolases of the PHP family n=3 Tax=Clostridiales RepID=D4LHM6_9FIRM
Histidinol phosphatase and related hydrolases of the PHP family
Histidinol phosphatase and related hydrolases of the PHP family {ECO:0000313|EMBL:CDE32590.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L1_007_000M1_scaffold_305_3
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2023..3114
DNA (1092bp) protein (364aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=3 Tax=Clostridiales RepID=D4LHM7_9FIRM
Prephenate dehydrogenase {ECO:0000313|EMBL:ERI89361.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_000M1_scaffold_305_4
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3186..4460
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Blautia sp. KLE 1732 RepID=U2E570_9FIRM
L1_007_000M1_scaffold_305_5
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4701..5687
DNA (987bp) protein (329aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.28)
Lactate dehydrogenase and related dehydrogenases n=2 Tax=Clostridiales RepID=D4LHM9_9FIRM
Putative D-lactate dehydrogenase {ECO:0000313|EMBL:ERI89363.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_000M1_scaffold_305_6
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5773..6309)
DNA (537bp) protein (179aa)
Ribonuclease n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHN0_9FIRM
ribonuclease.
Ribonuclease {ECO:0000313|EMBL:CBL19341.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_305_7
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6313..7158)
DNA (846bp) protein (282aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Endonuclease IV (EC:3.1.21.2 3.1.21.-)
Probable endonuclease 4 n=1 Tax=Blautia sp. KLE 1732 RepID=U2CXT4_9FIRM
L1_007_000M1_scaffold_305_8
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7312..8631
DNA (1320bp) protein (440aa)
Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H308_9FIRM
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) {ECO:0000313|EMBL:CDE32602.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L1_007_000M1_scaffold_305_9
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8734..9759)
DNA (1026bp) protein (342aa)
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Clostridiales RepID=D4LHN3_9FIRM
L1_007_000M1_scaffold_305_10
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9762..10514)
DNA (753bp) protein (251aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
tRNA (guanine-N(1)-)-methyltransferase n=3 Tax=Clostridiales RepID=D4LHN4_9FIRM
L1_007_000M1_scaffold_305_11
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10515..11021)
DNA (507bp) protein (169aa)
Ribosome maturation factor RimM n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GYV1_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
16S rRNA processing protein RimM
L1_007_000M1_scaffold_305_12
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11081..11311)
DNA (231bp) protein (77aa)
UPF0109 protein CK1_11730 n=3 Tax=Ruminococcus RepID=D4LHN7_9FIRM
RNA-binding protein (KH domain)
UPF0109 protein BN807_00708 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L1_007_000M1_scaffold_305_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11367..11612)
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=4 Tax=Clostridiales RepID=D4LHN8_9FIRM
SSU ribosomal protein S16P
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_305_14
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11658..13010)
DNA (1353bp) protein (451aa)
Signal recognition particle protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHN9_9FIRM
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306, ECO:0000313|EMBL:CBL19350.1}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_305_15
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13014..13337)
DNA (324bp) protein (108aa)
UPF0122 protein CK1_11760 n=3 Tax=Clostridiales RepID=D4LHP0_9FIRM
hypothetical protein
UPF0122 protein CK1_11760 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_305_16
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13635..15173
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H330_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE32622.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L1_007_000M1_scaffold_305_17
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15197..16021)
DNA (825bp) protein (275aa)
rRNA methylases n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHP1_9FIRM
rRNA methylases
rRNA methylases {ECO:0000313|EMBL:CBL19352.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_305_18
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16153..16959)
DNA (807bp) protein (269aa)
Lysophospholipase (EC:3.1.1.5)
Lysophospholipase {ECO:0000313|EMBL:CBL19353.1}; EC=3.1.1.5 {ECO:0000313|EMBL:CBL19353.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Lysophospholipase n=2 Tax=Clostridiales RepID=D4LHP2_9FIRM
L1_007_000M1_scaffold_305_19
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17275..19083)
DNA (1809bp) protein (603aa)
Na+/phosphate symporter n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHP3_9FIRM
Putative Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:ERI96239.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Na+/phosphate symporter
L1_007_000M1_scaffold_305_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19336..21189)
DNA (1854bp) protein (618aa)
C-5 cytosine-specific DNA methylase n=2 Tax=Clostridiales RepID=U2DIT1_9FIRM
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:ERI96238.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L1_007_000M1_scaffold_305_21
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21573..23411)
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GUR2_9FIRM
L1_007_000M1_scaffold_305_22
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23519..24730)
DNA (1212bp) protein (404aa)
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine dehydratase, medium form {ECO:0000313|EMBL:CBL19358.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CBL19358.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Threonine dehydratase, medium form n=3 Tax=Clostridiales RepID=D4LHP7_9FIRM
L1_007_000M1_scaffold_305_23
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24737..25675)
DNA (939bp) protein (313aa)
Signal recognition particle receptor FtsY n=3 Tax=Clostridiales RepID=D4LHP8_9FIRM
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_007_000M1_scaffold_305_24
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25694..29254)
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GRD3_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
condensin subunit Smc
L1_007_000M1_scaffold_305_25
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29268..29948)
DNA (681bp) protein (227aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Blautia sp. KLE 1732 RepID=U2ETB9_9FIRM
L1_007_000M1_scaffold_305_26
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29938..30186)
DNA (249bp) protein (83aa)
Acyl carrier protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1Q2_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Acyl carrier protein
L1_007_000M1_scaffold_305_27
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30235..31281)
DNA (1047bp) protein (349aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Phosphate acyltransferase n=2 Tax=Clostridiales RepID=R7GSF7_9FIRM
phosphate:acyl-[acyl carrier protein] acyltransferase
L1_007_000M1_scaffold_305_28
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31512..33347)
DNA (1836bp) protein (612aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=U2ENI4_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CDE29669.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_007_000M1_scaffold_305_29
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33803..34531
DNA (729bp) protein (243aa)
Response regulator receiver protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GRD9_9FIRM
Response regulator receiver protein {ECO:0000313|EMBL:CDE29670.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L1_007_000M1_scaffold_305_30
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34470..36404)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GRJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29671.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
signal transduction histidine kinase regulating citrate/malate metabolism
Displaying items 1-30 of 54 in total

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