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L1_007_000M1_scaffold_308

Search features with annotation key words

Displaying items 61-90 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_308_61
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66059..66853)
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Glutamate racemase n=15 Tax=Bifidobacterium RepID=MURI_BIFLD
murI; glutamate racemase
L1_007_000M1_scaffold_308_62
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66961..67854
DNA (894bp) protein (298aa)
Diaminopimelate epimerase {ECO:0000256|SAAS:SAAS00028055}; EC=5.1.1.7 {ECO:0000256|SAAS:SAAS00028063};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Diaminopimelate epimerase n=3 Tax=Bifidobacterium longum RepID=E8ME99_BIFL2
diaminopimelate epimerase
L1_007_000M1_scaffold_308_63
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67860..68477)
DNA (618bp) protein (206aa)
Vitamin K epoxide reductase family n=5 Tax=Bifidobacterium longum RepID=C2GW61_BIFLN
hypothetical protein
Vitamin K epoxide reductase family {ECO:0000313|EMBL:EEI80666.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_000M1_scaffold_308_64
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68479..68727
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:BAP83936.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_000M1_scaffold_308_65
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68735..69628
DNA (894bp) protein (298aa)
PHP domain protein {ECO:0000313|EMBL:EEI80667.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEI80667.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=Q8G7Z5_BIFLO
metal-dependent phosphoesterse
L1_007_000M1_scaffold_308_66
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69689..69913)
DNA (225bp) protein (75aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DQ55_BIFLD
Protein of unknown function (DUF3107).
Putative ATP-binding protein {ECO:0000313|EMBL:CCK35314.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_000M1_scaffold_308_67
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70062..71717)
DNA (1656bp) protein (552aa)
Predicted aminoglycoside phosphotransferase n=5 Tax=Bifidobacterium RepID=D6DB98_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI80669.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Predicted aminoglycoside phosphotransferase
L1_007_000M1_scaffold_308_68
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71863..73437
DNA (1575bp) protein (525aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
UvrD/REP helicase n=4 Tax=Bifidobacterium longum subsp. longum RepID=C2GW65_BIFLN
DNA helicase II
L1_007_000M1_scaffold_308_69
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73507..75252)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=Q8G7Z1_BIFLO
Hydrolase domain protein {ECO:0000313|EMBL:EIJ29853.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hydrolase
L1_007_000M1_scaffold_308_70
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75473..76354
DNA (882bp) protein (294aa)
Predicted secreted protein containing a PDZ domain n=4 Tax=Bifidobacterium RepID=D6DB96_BIFLN
Predicted secreted protein containing a PDZ domain
Hypothetical secreted protein {ECO:0000313|EMBL:ACD97558.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_000M1_scaffold_308_71
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76470..76886
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B3DQ60_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44012.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_000M1_scaffold_308_72
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77355..79058
DNA (1704bp) protein (568aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=B3DQ61_BIFLD
DivIVA domain repeat protein {ECO:0000313|EMBL:CBK69765.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
DivIVA domain repeat protein
L1_007_000M1_scaffold_308_73
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79055..80245
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=3 Tax=Bacteria RepID=DXR_BIFLD
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
L1_007_000M1_scaffold_308_74
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80242..81465
DNA (1224bp) protein (408aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=12 Tax=Bifidobacterium RepID=D6DB93_BIFLN
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L1_007_000M1_scaffold_308_75
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81586..83298
DNA (1713bp) protein (571aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C5EE11_BIFLI
Hydrolases of the alpha/beta superfamily {ECO:0000313|EMBL:CCK35304.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_007_000M1_scaffold_308_76
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83348..84067
DNA (720bp) protein (240aa)
DNA repair protein RecO n=11 Tax=Bacteria RepID=RECO_BIFLD
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000M1_scaffold_308_77
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84064..84858
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Isoprenyl transferase n=16 Tax=Bacteria RepID=ISPT_BIFLO
uppS; undecaprenyl pyrophosphate synthase
L1_007_000M1_scaffold_308_78
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85127..86314)
DNA (1188bp) protein (396aa)
UrhA1 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1I4_BIFLM
urhA1; urha1
Inosine-uridine preferring nucleoside hydrolase family protein {ECO:0000313|EMBL:BAP83922.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_000M1_scaffold_308_79
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86438..87508)
DNA (1071bp) protein (357aa)
Possible solute binding protein of ABC transporter n=2 Tax=Bifidobacterium longum RepID=Q8G7Y1_BIFLO
ABC transporter substrate-binding protein
Possible solute binding protein of ABC transporter {ECO:0000313|EMBL:BAP83921.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_000M1_scaffold_308_80
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87767..88549)
DNA (783bp) protein (261aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=10 Tax=Bifidobacterium RepID=D6DB86_BIFLN
ABC transporter permease
Putative ABC transporter permease component {ECO:0000313|EMBL:BAJ67009.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_000M1_scaffold_308_81
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88745..90301)
DNA (1557bp) protein (519aa)
Beta-fructofuranosidase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MUT1_BIFL1
Glycoside hydrolase family 32 beta-fructofuranosidase {ECO:0000313|EMBL:BAP83919.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
beta-fructofuranosidase
L1_007_000M1_scaffold_308_82
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90312..91649)
DNA (1338bp) protein (446aa)
Galactoside transport protein n=4 Tax=Bifidobacterium RepID=E8MUT0_BIFL1
cynX; cynx
Galactoside permease {ECO:0000313|EMBL:AIW44001.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_000M1_scaffold_308_83
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91863..92903)
DNA (1041bp) protein (347aa)
Probable LacI-type transcriptional regulator n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7X8_BIFLO
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY21766.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
LacI-type transcriptional regulator
L1_007_000M1_scaffold_308_84
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(92947..94344)
DNA (1398bp) protein (466aa)
Serpin n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BEQ0_BIFLN
serine protease inhibitor
Serpin {ECO:0000313|EMBL:AIW43999.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_000M1_scaffold_308_85
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94402..94812)
DNA (411bp) protein (137aa)
Uncharacterized protein n=12 Tax=Bacteria RepID=B3DQ74_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY31223.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_000M1_scaffold_308_86
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94959..95075
DNA (117bp) protein (39aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=B3DQ75_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD97574.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_000M1_scaffold_308_87
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95441..96820)
DNA (1380bp) protein (460aa)
Transport protein n=8 Tax=Bifidobacterium RepID=E8ME76_BIFL2
transport protein
MFS transporter permease {ECO:0000313|EMBL:KEY21769.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_000M1_scaffold_308_88
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97326..97703)
DNA (378bp) protein (126aa)
Uncharacterized protein n=17 Tax=Bacteria RepID=B3DQ77_BIFLD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67002.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_000M1_scaffold_308_89
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97754..98572)
DNA (819bp) protein (273aa)
Phosphomethylpyrimidine kinase n=16 Tax=Bacteria RepID=Q8G7X2_BIFLO
thiD; phosphomethylpyrimidine kinase
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CCY95046.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_000M1_scaffold_308_90
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98691..98837
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5MTH9_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95045.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Displaying items 61-90 of 108 in total

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