ggKbase home page

L1_007_000M1_scaffold_308

Search features with annotation key words

Displaying items 91-108 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_308_91
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(98874..101627)
DNA (2754bp) protein (918aa)
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Thiamine biosynthesis bifunctional protein ThiEC n=7 Tax=Bacteria RepID=THIEC_BIFLO
thiamine biosynthesis protein
L1_007_000M1_scaffold_308_92
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101710..102654)
DNA (945bp) protein (315aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Hydroxyethylthiazole kinase n=7 Tax=Bacteria RepID=E4R1J8_BIFLM
thiM; thim
L1_007_000M1_scaffold_308_93
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


103090..104562
DNA (1473bp) protein (491aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Glycine--tRNA ligase n=15 Tax=Bifidobacterium RepID=E4R1J9_BIFLM
glycyl-tRNA synthase
L1_007_000M1_scaffold_308_94
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

104707..105951
DNA (1245bp) protein (415aa)
Dihydrouridine synthase n=7 Tax=Bifidobacterium longum RepID=F8AUG1_BIFLN
dihydrouridine synthase
TIM-barrel protein, nifR3 family {ECO:0000313|EMBL:EEQ56277.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_000M1_scaffold_308_95
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

106063..107274
DNA (1212bp) protein (404aa)
Cell division protein FtsZ n=9 Tax=Bifidobacterium RepID=B3DQ83_BIFLD
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_000M1_scaffold_308_96
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107287..107766
DNA (480bp) protein (160aa)
Cell division protein SepF n=21 Tax=Bacteria RepID=SEPF_BIFLD
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_000M1_scaffold_308_97
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107888..108190
DNA (303bp) protein (101aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=B7GQ25_BIFLS
hypothetical protein
Hemolysin {ECO:0000313|EMBL:KHD94169.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_000M1_scaffold_308_98
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

108330..109709
DNA (1380bp) protein (460aa)
Cell division initiation protein n=3 Tax=Bifidobacterium RepID=F8AUG5_BIFLN
cell division initiation protein
Dihydrouridine synthase {ECO:0000313|EMBL:KHD94168.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_000M1_scaffold_308_99
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

109731..110279
DNA (549bp) protein (183aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Lipoprotein signal peptidase n=4 Tax=Bifidobacterium longum RepID=D6DB71_BIFLN
peptidase A8
L1_007_000M1_scaffold_308_100
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110279..111241
DNA (963bp) protein (321aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Uncharacterized protein n=10 Tax=Bacteria RepID=Q8G7W2_BIFLO
hypothetical protein
L1_007_000M1_scaffold_308_101
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111557..112030
DNA (474bp) protein (158aa)
Uncharacterized protein n=10 Tax=Bacteria RepID=V6XXF3_BIFLN
hypothetical protein
PF13635 domain protein {ECO:0000313|EMBL:EIJ29841.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_000M1_scaffold_308_102
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112235..113101
DNA (867bp) protein (289aa)
Ribonuclease BN-like family protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XVK4_9BIFI
hypothetical protein
Narrowly conserved hypothetical membrane protein {ECO:0000313|EMBL:AAN23990.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_000M1_scaffold_308_103
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113182..113553)
DNA (372bp) protein (124aa)
Uncharacterized protein n=8 Tax=Bacteria RepID=B3DQ91_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:EEQ56287.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L1_007_000M1_scaffold_308_104
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113598..117167
DNA (3570bp) protein (1190aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
DNA polymerase III, alpha subunit n=3 Tax=Bifidobacterium longum RepID=C5EE44_BIFLI
DNA polymerase III subunit alpha
L1_007_000M1_scaffold_308_105
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117241..117690
DNA (450bp) protein (150aa)
PF13811 domain protein n=4 Tax=Bifidobacterium longum subsp. longum RepID=I3AVI0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP83895.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_000M1_scaffold_308_106
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117896..119773
DNA (1878bp) protein (626aa)
Myosin-crossreactive antigen n=13 Tax=Bifidobacterium longum RepID=D6DB56_BIFLN
Myosin-crossreactive antigen {ECO:0000313|EMBL:CBK69727.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
hypothetical protein
L1_007_000M1_scaffold_308_107
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

119870..120370
DNA (501bp) protein (167aa)
Acetyltransferase n=12 Tax=Bifidobacterium RepID=B3DQ95_BIFLD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:KEY31202.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_000M1_scaffold_308_108
Bifidobacterium thermacidophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

120714..120866
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6E3_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KFJ01123.1}; TaxID=212365 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium thermacidophilum subsp. porcinum.;"
Displaying items 91-108 of 108 in total

View Taxonomy