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L1_007_000M1_scaffold_317

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_317_1
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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comp(904..1887)
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DHP8_TRIVA
Putative uncharacterized protein {ECO:0000313|EMBL:EAY20096.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
L1_007_000M1_scaffold_317_2
unknown

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2060..2236
DNA (177bp) protein (59aa)

This feature has no annotations

L1_007_000M1_scaffold_317_3
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(2290..3126)
DNA (837bp) protein (279aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IMB1_THETR
5-keto 4-deoxyuronate isomerase
L1_007_000M1_scaffold_317_4
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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comp(3255..4172)
DNA (918bp) protein (306aa)
parB-like partition protein
ParB-like partition protein id=4020652 bin=GWC2_Clostridiales_40_7 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Tax=GWC2_Clostridiales_40_7_curated
L1_007_000M1_scaffold_317_5
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4288..4518)
DNA (231bp) protein (77aa)
Sporulation protein, YlmC/YmxH family n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DKC0_DESRL
YlmC/YmxH family sporulation protein
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:AEG61537.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L1_007_000M1_scaffold_317_6
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4590..5864)
DNA (1275bp) protein (425aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
LL-diaminopimelate aminotransferase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNN1_CELLD
L1_007_000M1_scaffold_317_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5895..6749)
DNA (855bp) protein (285aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L000_9FIRM
L1_007_000M1_scaffold_317_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6926..7297
DNA (372bp) protein (124aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LVG5_9CLOT
Zn-finger containing protein {ECO:0000313|EMBL:KGJ51332.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Zn-finger containing protein
L1_007_000M1_scaffold_317_9
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7426..7671)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JVH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE67651.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L1_007_000M1_scaffold_317_10
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(7694..8686)
DNA (993bp) protein (331aa)
CoA-substrate-specific enzyme activase n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TIV4_CALOO
CoA-substrate-specific enzyme activase
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:ADL41936.1}; TaxID=608506 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47).;"
L1_007_000M1_scaffold_317_11
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8702..9925)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TIV3_CALOO
Uncharacterized protein {ECO:0000313|EMBL:KJF26096.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
L1_007_000M1_scaffold_317_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9922..10911)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HNX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGG80480.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
L1_007_000M1_scaffold_317_13
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(11286..14066)
DNA (2781bp) protein (927aa)
S-layer domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIN5_9FIRM
S-layer domain protein {ECO:0000313|EMBL:CDB94131.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
S-layer protein
L1_007_000M1_scaffold_317_14
Prevotella sp. CAG:255, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14059..20271)
DNA (6213bp) protein (2071aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:255 RepID=R5CN73_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCX69395.1}; TaxID=1262923 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:255.;"
pectate lyase
L1_007_000M1_scaffold_317_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20575..21927)
DNA (1353bp) protein (451aa)
Transporter n=1 Tax=Clostridium leptum CAG:27 RepID=R6N8C6_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L1_007_000M1_scaffold_317_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22066..22518
DNA (453bp) protein (151aa)
C_GCAxxG_C_C family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9N6_9CLOT
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:EHJ01193.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
C_GCAxxG_C_C family protein
L1_007_000M1_scaffold_317_17
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22602..27836)
DNA (5235bp) protein (1745aa)
Uncharacterized protein (Fragment) n=2 Tax=Clostridium sp. ASF356 RepID=N1ZLN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13459.1}; Flags: Fragment;; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
S-layer protein
L1_007_000M1_scaffold_317_18
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28169..28561)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q1D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20159.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
L1_007_000M1_scaffold_317_19
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(28795..31659)
DNA (2865bp) protein (955aa)
S-layer domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIN5_9FIRM
S-layer domain protein {ECO:0000313|EMBL:CDB94131.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
S-layer protein
L1_007_000M1_scaffold_317_20
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31914..33158)
DNA (1245bp) protein (415aa)
Peptidase U32 n=7 Tax=Clostridium thermocellum RepID=A3DE63_CLOTH
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ABN52242.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_007_000M1_scaffold_317_21
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(33308..34762)
DNA (1455bp) protein (485aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Thermococcus sp. AM4 RepID=B7R4S5_9EURY
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EEB73171.1}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
L1_007_000M1_scaffold_317_22
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35503..35766)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KRM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67724.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_000M1_scaffold_317_23
unknown

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comp(35897..35989)
DNA (93bp) protein (31aa)

This feature has no annotations

L1_007_000M1_scaffold_317_24
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36468..37484
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Clostridium sp. CAG:265 RepID=R6KU30_9CLOT
L1_007_000M1_scaffold_317_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37955..38440)
DNA (486bp) protein (162aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9WX74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ57537.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
nimA; 5-nitroimidazole resistance protein NimA
L1_007_000M1_scaffold_317_26
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38467..39777)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XQ35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06547.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
MATE efflux family protein
L1_007_000M1_scaffold_317_27
unknown

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comp(39992..40399)
DNA (408bp) protein (136aa)

This feature has no annotations

L1_007_000M1_scaffold_317_28
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(40415..42535)
DNA (2121bp) protein (707aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MMI7_9FIRM
L1_007_000M1_scaffold_317_29
Leptotrichia buccalis, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(42795..43367)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) RepID=C7NAB4_LEPBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV39095.1}; TaxID=523794 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC; 10249).;"
L1_007_000M1_scaffold_317_30
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43516..44967)
DNA (1452bp) protein (484aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC0_9FIRM
ppic-type peptidyl-prolyl cis-trans isomerase
Displaying items 1-30 of 42 in total

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