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L1_007_000M1_scaffold_327

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_327_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

276..1640
DNA (1365bp) protein (455aa)
Uncharacterized protein n=2 Tax=Clostridiaceae RepID=R0CLH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61828.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
coenzyme PQQ biosynthesis protein E
L1_007_000M1_scaffold_327_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1640..1927
DNA (288bp) protein (96aa)
DegV family EDD domain-containing protein n=2 Tax=Clostridiaceae RepID=R0CWQ0_9CLOT
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENZ61829.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
degV family protein
L1_007_000M1_scaffold_327_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1975..2400
DNA (426bp) protein (142aa)
DegV family EDD domain-containing protein n=2 Tax=Clostridiaceae RepID=R0CWQ0_9CLOT
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EOQ37980.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L1_007_000M1_scaffold_327_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2528..3214
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0BBT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61830.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_327_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3679..4092
DNA (414bp) protein (138aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0BBE9_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ61831.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Sigma-70, region 4.
L1_007_000M1_scaffold_327_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4665..4895
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CYJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61832.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L1_007_000M1_scaffold_327_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4980..6200
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CLH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61833.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
integrase family protein
L1_007_000M1_scaffold_327_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6356..7549
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61834.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Site-specific recombinase XerD
L1_007_000M1_scaffold_327_9
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7909..8961)
DNA (1053bp) protein (351aa)
Site-specific recombinase n=2 Tax=Clostridiales RepID=G2T0J6_ROSHA
site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:AEN95528.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_000M1_scaffold_327_10
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9007..9648)
DNA (642bp) protein (214aa)
Toxin-antitoxin system n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GEV4_EUBLK
toxin-antitoxin system
Toxin-antitoxin system {ECO:0000313|EMBL:ADO37784.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_007_000M1_scaffold_327_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9817..10053
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N4U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47350.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_007_000M1_scaffold_327_12
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10099..10464
DNA (366bp) protein (122aa)
Sugar-specific transcriptional regulator TrmB n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PTI8_9FIRM
Sugar-specific transcriptional regulator TrmB {ECO:0000313|EMBL:CCZ19890.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L1_007_000M1_scaffold_327_13
unknown

Not on your lists

10515..10868
DNA (354bp) protein (118aa)

This feature has no annotations

L1_007_000M1_scaffold_327_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10967..11323
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70771.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L1_007_000M1_scaffold_327_15
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11412..11762
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WWS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67548.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
MocB-like protein
L1_007_000M1_scaffold_327_16
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11885..13093
DNA (1209bp) protein (403aa)
Relaxase n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0JDE4_9FIRM
Relaxase {ECO:0000313|EMBL:EQB19892.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
Relaxase
L1_007_000M1_scaffold_327_17
unknown

Not on your lists

13102..13254
DNA (153bp) protein (51aa)

This feature has no annotations

L1_007_000M1_scaffold_327_18
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13486..14466)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ARS3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57269.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L1_007_000M1_scaffold_327_19
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14489..15682)
DNA (1194bp) protein (398aa)
Cysteine desulfurase (EC:2.8.1.7)
Putative cysteine desulfurase n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2UK88_9FIRM
Putative cysteine desulfurase {ECO:0000313|EMBL:ERL25319.1}; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
L1_007_000M1_scaffold_327_20
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15664..15861)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV00610.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_007_000M1_scaffold_327_21
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15851..17296)
DNA (1446bp) protein (482aa)
ATP-dependent Lon-type protease-like protein n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H461_DENA2
ATP-dependent Lon-type protease-like protein
Tax=GWC2_Geobacteraceae_58_44_curated
L1_007_000M1_scaffold_327_22
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17309..19579)
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV00612.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_007_000M1_scaffold_327_23
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19591..22263)
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV00613.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_007_000M1_scaffold_327_24
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22287..23786)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV00613.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_007_000M1_scaffold_327_25
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23799..26120)
DNA (2322bp) protein (774aa)
Phosphoadenosine phosphosulfate reductase family protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK96_9FIRM
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:EFV00615.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
phosphoadenosine phosphosulfate reductase
L1_007_000M1_scaffold_327_26
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26125..28707)
DNA (2583bp) protein (861aa)
Uncharacterized protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MK97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV00616.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_007_000M1_scaffold_327_27
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29194..29400)
DNA (207bp) protein (69aa)
Predicted transcriptional regulator n=8 Tax=root RepID=D4M0C1_9FIRM
Predicted transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ERK45945.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
L1_007_000M1_scaffold_327_28
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30057..30917)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJS5_9CLOT
HTH-type transcriptional activator CmpR {ECO:0000313|EMBL:KJJ73290.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Transcriptional regulator
L1_007_000M1_scaffold_327_29
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31069..31815
DNA (747bp) protein (249aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Glutamate 5-kinase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JLT2_9FIRM
Glutamate 5-kinase
L1_007_000M1_scaffold_327_30
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31860..32741
DNA (882bp) protein (294aa)
Putative permease n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XWJ6_9FIRM
Putative permease {ECO:0000313|EMBL:EHQ90504.1}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
permease, DMT superfamily
Displaying items 1-30 of 87 in total

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