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L1_007_000M1_scaffold_327

Search features with annotation key words

Displaying items 31-60 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_327_31
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33247..34662
DNA (1416bp) protein (472aa)
Sodium/alanine symporter n=1 Tax=Eubacterium sp. CAG:252 RepID=R6L3W3_9FIRM
Sodium/alanine symporter {ECO:0000313|EMBL:CDB68932.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
hypothetical protein
L1_007_000M1_scaffold_327_32
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35024..36787
DNA (1764bp) protein (588aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Threonine--tRNA ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7II00_9FIRM
hypothetical protein
L1_007_000M1_scaffold_327_33
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(36941..37117)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C0V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD71402.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L1_007_000M1_scaffold_327_34
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

37522..38748
DNA (1227bp) protein (409aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Phosphofructokinase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHJ8_9FIRM
phosphofructokinase
L1_007_000M1_scaffold_327_35
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39952..40395)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG55959.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L1_007_000M1_scaffold_327_36
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40572..40889
DNA (318bp) protein (106aa)
Putative transcriptional regulator n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A7V6_DESDJ
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFM00041.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L1_007_000M1_scaffold_327_37
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40928..41236
DNA (309bp) protein (103aa)
Putative transcriptional regulator n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A7V6_DESDJ
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFM00041.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L1_007_000M1_scaffold_327_38
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(42035..43537)
DNA (1503bp) protein (501aa)
Inositol-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PAJ8_9FIRM
Inositol-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) {ECO:0000313|EMBL:CDC21338.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
IMP dehydrogenase
L1_007_000M1_scaffold_327_39
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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44188..44466
DNA (279bp) protein (93aa)
Histone family protein DNA-binding protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LSR9_TEPAE
histone family protein DNA-binding protein
Non-specific DNA-binding protein HBsu signal recognition particle-like (SRP) component {ECO:0000313|EMBL:CCP24876.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L1_007_000M1_scaffold_327_40
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44648..45649)
DNA (1002bp) protein (334aa)
MreB n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VK88_CLOSH
mreB1; MreB
MreB-like protein Mbl {ECO:0000313|EMBL:AGC67117.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L1_007_000M1_scaffold_327_41
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

45933..46892
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ABA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX40490.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
pstS2; phosphate ABC transporter substrate-binding protein
L1_007_000M1_scaffold_327_42
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

46920..47774
DNA (855bp) protein (285aa)
Phosphate ABC transporter n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD87_9FIRM
Phosphate ABC transporter {ECO:0000313|EMBL:CDC45810.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
phosphate ABC transporter inner membrane subunit PstC
L1_007_000M1_scaffold_327_43
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

47771..48664
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=4129774 bin=GWF2_Clostridiales_36_10 species=Clostridium nexile genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
phosphate ABC transporter inner membrane subunit PstA
Tax=GWF2_Clostridiales_36_10_curated
L1_007_000M1_scaffold_327_44
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48720..49469
DNA (750bp) protein (250aa)
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Phosphate ABC transporter ATP-binding protein PhoT family (TC 3.A.1.7.1) n=2 Tax=Clostridiales RepID=R7GRG3_9FIRM
L1_007_000M1_scaffold_327_45
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

49474..50115
DNA (642bp) protein (214aa)
Phosphate uptake regulator, PhoU id=4129776 bin=GWF2_Clostridiales_36_10 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
phoU; PhoU
Tax=GWF2_Clostridiales_36_10_curated
L1_007_000M1_scaffold_327_46
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50128..50808
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80855.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_327_47
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

50870..52558
DNA (1689bp) protein (563aa)
walK; sensor protein kinase WalK (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase id=4129778 bin=GWF2_Clostridiales_36_10 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L1_007_000M1_scaffold_327_48
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

53246..53641
DNA (396bp) protein (132aa)
DNA-binding helix-turn-helix protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVS0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEF92733.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Predicted transcriptional regulators
L1_007_000M1_scaffold_327_49
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53680..54483
DNA (804bp) protein (268aa)
ABC transporter family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEM8_CLOBI
ABC transporter family protein {ECO:0000313|EMBL:EQK39585.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
putative ABC transporter ATP-binding protein
L1_007_000M1_scaffold_327_50
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54476..55228
DNA (753bp) protein (251aa)
ABC-2 transporter family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VFR3_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ49014.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L1_007_000M1_scaffold_327_51
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55242..55649
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VFY7_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK39587.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L1_007_000M1_scaffold_327_52
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56247..56459)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO62975.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_327_53
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56565..57947)
DNA (1383bp) protein (461aa)
GntR family transcriptional regulator n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7IC02_9CLOT
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:ETA82402.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
L1_007_000M1_scaffold_327_54
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58122..62036
DNA (3915bp) protein (1305aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7E9_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CDE35280.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L1_007_000M1_scaffold_327_55
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(63000..63323)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y0F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15469.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L1_007_000M1_scaffold_327_56
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

63455..63721
DNA (267bp) protein (89aa)
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
L1_007_000M1_scaffold_327_57
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(63832..64107)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5A8Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX39595.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
barnase inhibitor
L1_007_000M1_scaffold_327_58
Lactobacillus animalis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(64583..65419)
DNA (837bp) protein (279aa)
putative acetyl esterase (EC:3.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XTH1_9CLOT
Xylan esterase/lipase {ECO:0000313|EMBL:KDA46914.1}; TaxID=1605 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus animalis.;"
L1_007_000M1_scaffold_327_59
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65447..65884)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium A2 RepID=R9KVU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47642.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L1_007_000M1_scaffold_327_60
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65909..66382)
DNA (474bp) protein (158aa)
SsrA-binding protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L0K5_OSCVS
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Displaying items 31-60 of 87 in total

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