ggKbase home page

L1_007_000M1_scaffold_329

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_329_1
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..131)
-----------------
DNA (129bp)
protein (43aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:564 RepID=R5MCK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY87384.1}; TaxID=1263049 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:564.;"
L1_007_000M1_scaffold_329_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(227..721)
-----------------
DNA (495bp)
protein (165aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=8 Tax=Bacteroides RepID=A7V760_BACUN
L1_007_000M1_scaffold_329_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(865..1548)
-----------------
DNA (684bp)
protein (228aa)
Tetratricopeptide repeat protein n=3 Tax=root RepID=A7V759_BACUN
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDO52629.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L1_007_000M1_scaffold_329_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1786..2898
-----------------
DNA (1113bp)
protein (371aa)
DNA replication and repair protein RecF n=6 Tax=Bacteroides RepID=I8ZB37_BACUN
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
DNA replication and repair protein RecF
L1_007_000M1_scaffold_329_5
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2895..3185
-----------------
DNA (291bp)
protein (97aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V756_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE00431.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L1_007_000M1_scaffold_329_6
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3178..3963)
-----------------
DNA (786bp)
protein (262aa)
Histidinol phosphate phosphatase HisJ family protein n=5 Tax=root RepID=E5VFZ8_9BACE
Histidinol phosphate phosphatase HisJ family protein {ECO:0000313|EMBL:EFV24235.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
histidinol phosphate phosphatase
L1_007_000M1_scaffold_329_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3960..4454)
-----------------
DNA (495bp)
protein (165aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I1M0_BACUN
5-formyltetrahydrofolate cyclo-ligase
L1_007_000M1_scaffold_329_8
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4408..6147)
-----------------
DNA (1740bp)
protein (580aa)
Peptidase, S41 family {ECO:0000313|EMBL:EFA21611.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFA21611.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Peptidase, S41 family n=6 Tax=root RepID=D2EUI4_9BACE
peptidase 3
L1_007_000M1_scaffold_329_9
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6205..6663)
-----------------
DNA (459bp)
protein (153aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=5 Tax=Bacteroides RepID=A7V752_BACUN
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EFA21610.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
CMP/dCMP deaminase zinc-binding protein
L1_007_000M1_scaffold_329_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6676..7170)
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EUI2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA21609.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L1_007_000M1_scaffold_329_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7197..9254)
-----------------
DNA (2058bp)
protein (686aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Peptidyl-dipeptidase Dcp n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I1E9_BACUN
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EOS10113.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L1_007_000M1_scaffold_329_12
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9395..10405)
-----------------
DNA (1011bp)
protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PSJ1_9BACE
L1_007_000M1_scaffold_329_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10486..10920
-----------------
DNA (435bp)
protein (145aa)
Large-conductance mechanosensitive channel n=6 Tax=Bacteroides RepID=D2EUH9_9BACE
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
large conductance mechanosensitive channel protein
L1_007_000M1_scaffold_329_14
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11047..11358)
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9TSX3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE00418.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L1_007_000M1_scaffold_329_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11383..12936
-----------------
DNA (1554bp)
protein (518aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
GMP synthase (glutamine-hydrolyzing) (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=5 Tax=Bacteroides RepID=A7V745_BACUN
L1_007_000M1_scaffold_329_16
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12976..14283
-----------------
DNA (1308bp)
protein (436aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
GMP synthase (Glutamine-hydrolyzing) domain protein n=6 Tax=Bacteroides RepID=A7V744_BACUN
GMP synthase
L1_007_000M1_scaffold_329_17
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14365..15051
-----------------
DNA (687bp)
protein (229aa)
GDSL-like protein n=5 Tax=Bacteroides RepID=A7V743_BACUN
GDSL-like Lipase/Acylhydrolase {ECO:0000313|EMBL:EFV24225.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
putative acylhydrolase
L1_007_000M1_scaffold_329_18
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15072..15734)
-----------------
DNA (663bp)
protein (221aa)
Cyclic nucleotide-binding domain protein n=5 Tax=Bacteroides RepID=A7V742_BACUN
Cyclic nucleotide-binding domain-containing protein {ECO:0000313|EMBL:EFV24224.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Crp/Fnr family transcriptional regulator
L1_007_000M1_scaffold_329_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15836..16525)
-----------------
DNA (690bp)
protein (230aa)
Peptidase, S54 family n=5 Tax=Bacteroides RepID=A7V741_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY72726.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L1_007_000M1_scaffold_329_20
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16543..16659)
-----------------
DNA (117bp)
protein (39aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZCS4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE00412.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L1_007_000M1_scaffold_329_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16696..18636
-----------------
DNA (1941bp)
protein (647aa)
Amylo-alpha-1,6-glucosidase n=6 Tax=Bacteroides RepID=E5VFY5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS10123.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
amylo-alpha-1,6-glucosidase
L1_007_000M1_scaffold_329_22
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18651..19919
-----------------
DNA (1269bp)
protein (423aa)
Glycosyl transferase group 1 n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VFY4_9BACE
Glycosyl transferase group 1 {ECO:0000313|EMBL:EFV24221.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
glycosyl transferase group 1
L1_007_000M1_scaffold_329_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19937..21352
-----------------
DNA (1416bp)
protein (472aa)
ATP synthase F1 subunit epsilon (EC:3.2.1.1)
Alpha-amylase n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I9T4_BACUN
Alpha-amylase {ECO:0000313|EMBL:EOS10125.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L1_007_000M1_scaffold_329_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21433..23016)
-----------------
DNA (1584bp)
protein (528aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=D2EUG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY72731.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L1_007_000M1_scaffold_329_25
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23040..23864)
-----------------
DNA (825bp)
protein (275aa)
glycogen synthase (UDP-glucose) (EC:2.4.1.21)
Starch synthase catalytic domain protein n=3 Tax=Bacteroides RepID=A7V735_BACUN
Starch synthase catalytic domain-containing protein {ECO:0000313|EMBL:EFV24280.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L1_007_000M1_scaffold_329_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24111..24968
-----------------
DNA (858bp)
protein (286aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=4 Tax=Bacteroides RepID=A7V734_BACUN
L1_007_000M1_scaffold_329_27
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25001..25354
-----------------
DNA (354bp)
protein (118aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=7 Tax=Bacteroides RepID=A7V733_BACUN
L1_007_000M1_scaffold_329_28
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25418..27064)
-----------------
DNA (1647bp)
protein (549aa)
Peptidase, S41 family n=1 Tax=Bacteroides sp. D20 RepID=D2EUG5_9BACE
Peptidase, S41 family {ECO:0000313|EMBL:EFA21592.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
peptidase S41
L1_007_000M1_scaffold_329_29
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27172..29472)
-----------------
DNA (2301bp)
protein (767aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:KDS51683.1}; EC=1.4.1.13 {ECO:0000313|EMBL:KDS51683.1};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I205_BACUN
bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta
L1_007_000M1_scaffold_329_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29669..31804
-----------------
DNA (2136bp)
protein (712aa)
Uncharacterized protein n=3 Tax=Bacteroides uniformis RepID=I8ZCT4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY72737.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
Displaying items 1-30 of 93 in total

View Taxonomy