name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L1_007_000M1_scaffold_336_1
unknown
|
Not on your lists |
3..431
----------------- DNA (429bp) protein (143aa) |
This feature has no annotations |
|
L1_007_000M1_scaffold_336_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(422..1792)
----------------- DNA (1371bp) protein (457aa) |
DNA repair protein radA n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI77_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
DNA repair protein RadA
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L1_007_000M1_scaffold_336_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(1796..2209)
----------------- DNA (414bp) protein (138aa) |
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77734.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_336_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(2254..4698)
----------------- DNA (2445bp) protein (815aa) |
ATPase AAA-2 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHJ5_9FIRM
ATPase AAA-2 {ECO:0000313|EMBL:CCZ77733.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATPase AAA-2
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|
L1_007_000M1_scaffold_336_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(4722..6365)
----------------- DNA (1644bp) protein (548aa) |
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77732.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_336_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(6382..8133)
----------------- DNA (1752bp) protein (584aa) |
Beta-N-acetylglucosaminidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2W1_9FIRM
Beta-N-acetylglucosaminidase {ECO:0000313|EMBL:CCZ77731.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Beta-N-acetylglucosaminidase
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L1_007_000M1_scaffold_336_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(8224..9189)
----------------- DNA (966bp) protein (322aa) |
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77730.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glycosyltransferases involved in cell wall biogenesis
|
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L1_007_000M1_scaffold_336_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(9146..11716)
----------------- DNA (2571bp) protein (857aa) |
Predicted membrane protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPL6_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCZ77729.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted membrane protein
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L1_007_000M1_scaffold_336_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(11709..13553)
----------------- DNA (1845bp) protein (615aa) |
Phosphoglycerol transferase and related proteins alkaline phosphatase superfamily n=2 Tax=root RepID=R5UHJ0_9FIRM
Phosphoglycerol transferase and related proteins alkaline phosphatase superfamily {ECO:0000313|EMBL:CCZ77728.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sulfatase
|
|
L1_007_000M1_scaffold_336_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(13642..13914)
----------------- DNA (273bp) protein (91aa) |
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77727.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
|
|
L1_007_000M1_scaffold_336_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(13940..14155)
----------------- DNA (216bp) protein (72aa) |
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77726.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
XRE family transcriptional regulator protein
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|
L1_007_000M1_scaffold_336_12
unknown
|
Not on your lists |
14271..14540
----------------- DNA (270bp) protein (90aa) |
This feature has no annotations |
|
L1_007_000M1_scaffold_336_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(14530..15798)
----------------- DNA (1269bp) protein (423aa) |
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI69_9FIRM
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CCZ77725.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
|
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L1_007_000M1_scaffold_336_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
15948..16685
----------------- DNA (738bp) protein (246aa) |
Soluble lytic murein transglycosylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPL1_9FIRM
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:CCZ77724.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
|
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L1_007_000M1_scaffold_336_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(16763..17668)
----------------- DNA (906bp) protein (302aa) |
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77723.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ribosomal protein S1
|
|
L1_007_000M1_scaffold_336_16
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(18051..18641)
----------------- DNA (591bp) protein (197aa) |
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YF66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA26123.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Predicted phosphoesterases, related to the Icc protein
|
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L1_007_000M1_scaffold_336_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(18641..20557)
----------------- DNA (1917bp) protein (639aa) |
Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2V1_9FIRM
Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein {ECO:0000313|EMBL:CCZ77721.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
|
|
L1_007_000M1_scaffold_336_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
20720..21301
----------------- DNA (582bp) protein (194aa) |
Chemotaxis protein CheC inhibitor of MCP methylation n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI63_9FIRM
Chemotaxis protein CheC inhibitor of MCP methylation {ECO:0000313|EMBL:CCZ77720.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Chemotaxis protein CheC, inhibitor of MCP methylation
|
|
L1_007_000M1_scaffold_336_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21302..21661
----------------- DNA (360bp) protein (120aa) |
Two-component response regulator involved in modulation of flagellar n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPK7_9FIRM
Two-component response regulator involved in modulation of flagellar {ECO:0000313|EMBL:CCZ77719.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
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L1_007_000M1_scaffold_336_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21693..21827
----------------- DNA (135bp) protein (45aa) |
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77718.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
|
|
L1_007_000M1_scaffold_336_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(21763..22416)
----------------- DNA (654bp) protein (218aa) |
Negative regulator of genetic competence sporulation and motility n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAJ1_9FIRM
Negative regulator of genetic competence sporulation and motility {ECO:0000313|EMBL:CCZ77717.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Negative regulator of genetic competence, sporulation and motility
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|
L1_007_000M1_scaffold_336_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22421..23008)
----------------- DNA (588bp) protein (196aa) |
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase factor sigma-70 n=2 Tax=root RepID=R5V2U7_9FIRM
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:CCZ77716.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
|
|
L1_007_000M1_scaffold_336_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(23016..23786)
----------------- DNA (771bp) protein (257aa) |
rRNA methylase, putative, group 3 (EC:2.1.1.-)
Putative tRNA/rRNA methyltransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZBD3_9FIRM
Putative tRNA/rRNA methyltransferase {ECO:0000313|EMBL:CCZ77715.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
|
|
L1_007_000M1_scaffold_336_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(23798..24232)
----------------- DNA (435bp) protein (145aa) |
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Mini-ribonuclease 3 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPK5_9FIRM
putative ribonuclease III
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L1_007_000M1_scaffold_336_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(24229..25659)
----------------- DNA (1431bp) protein (477aa) |
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHH6_9FIRM
|
|
L1_007_000M1_scaffold_336_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(25735..26262)
----------------- DNA (528bp) protein (176aa) |
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAI7_9FIRM
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
|
|
L1_007_000M1_scaffold_336_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(26469..27452)
----------------- DNA (984bp) protein (328aa) |
Phosphate acetyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2U1_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:CCZ77711.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phosphate acetyltransferase
|
|
L1_007_000M1_scaffold_336_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(27647..28954)
----------------- DNA (1308bp) protein (436aa) |
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI54_9FIRM
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CCZ77710.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
|
|
L1_007_000M1_scaffold_336_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(29832..30887)
----------------- DNA (1056bp) protein (352aa) |
Guanylate kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPK0_9FIRM
Guanylate kinase {ECO:0000313|EMBL:CCZ77709.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Guanylate kinase
|
|
L1_007_000M1_scaffold_336_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(30926..31384)
----------------- DNA (459bp) protein (153aa) |
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHH2_9FIRM
FKBP-type peptidyl-prolyl cis-trans isomerases 2
|