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L1_007_000M1_scaffold_338

Search features with annotation key words

Displaying items 31-60 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_338_31
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45833..46825
DNA (993bp) protein (331aa)
Oxidoreductase aldo/keto reductase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4R0_9PORP
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CDD13382.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
oxidoreductase
L1_007_000M1_scaffold_338_32
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46866..49796
DNA (2931bp) protein (977aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13383.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_338_33
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49802..50473)
DNA (672bp) protein (224aa)
TIGR02453 family protein n=3 Tax=Parabacteroides RepID=A7AFT6_9PORP
TIGR02453 family protein {ECO:0000313|EMBL:EDN85992.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_338_34
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50491..51360)
DNA (870bp) protein (290aa)
Transcriptional regulator AraC family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVN9_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD13385.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_338_35
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51484..52662
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAL2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13386.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
MFS transport protein AraJ
L1_007_000M1_scaffold_338_36
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52629..54071)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZWG0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15665.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Predicted oxidoreductases of the aldo/keto reductase family
L1_007_000M1_scaffold_338_37
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54097..55602)
DNA (1506bp) protein (502aa)
Putative ferredoxin-type protein NapF n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6Y6_9PORP
Putative ferredoxin-type protein NapF {ECO:0000313|EMBL:CDD14889.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ferredoxin-type protein
L1_007_000M1_scaffold_338_38
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55712..56572)
DNA (861bp) protein (287aa)
Putative esterase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WU68_9PORP
Putative esterase {ECO:0000313|EMBL:CDD14888.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
esterase
L1_007_000M1_scaffold_338_39
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56682..57620)
DNA (939bp) protein (313aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
2-dehydropantoate 2-reductase n=3 Tax=Parabacteroides merdae RepID=A7AFU7_9PORP
2-dehydropantoate 2-reductase
L1_007_000M1_scaffold_338_40
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57669..58529)
DNA (861bp) protein (287aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Putative pyridoxal kinase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZI4_9PORP
pyridoxal kinase
L1_007_000M1_scaffold_338_41
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

58604..59668
DNA (1065bp) protein (355aa)
Methionine-R-sulfoxide reductase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6F7_9PORP
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:CDD14724.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
bifunctional methionine sulfoxide reductase A/B
L1_007_000M1_scaffold_338_42
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59716..60897)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFV0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86006.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Predicted membrane protein
L1_007_000M1_scaffold_338_43
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

61406..61879
DNA (474bp) protein (158aa)
Thioredoxin n=2 Tax=Parabacteroides merdae RepID=K6B1J8_9PORP
Thioredoxin {ECO:0000313|EMBL:EKN15672.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
thioredoxin
L1_007_000M1_scaffold_338_44
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(62045..62593)
DNA (549bp) protein (183aa)
30S ribosomal protein S16 n=2 Tax=Parabacteroides merdae RepID=A7AFV5_9PORP
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rpsP; 30S ribosomal protein S16
L1_007_000M1_scaffold_338_45
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62743..63684
DNA (942bp) protein (314aa)
Glycosyl hydrolase, family 43 n=2 Tax=Parabacteroides merdae RepID=A7AFV6_9PORP
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EDN86012.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
1,4-beta-xylanase
L1_007_000M1_scaffold_338_46
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

63856..65493
DNA (1638bp) protein (546aa)
ABC transporter, ATP-binding protein n=2 Tax=Parabacteroides merdae RepID=A7AFW0_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN86016.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L1_007_000M1_scaffold_338_47
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65490..66968)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFW1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11365.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_338_48
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

67125..67736
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFW2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86018.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transmembrane protein
L1_007_000M1_scaffold_338_49
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

67755..68825
DNA (1071bp) protein (357aa)
L-asparaginase type I n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYQ7_9PORP
L-asparaginase type I {ECO:0000313|EMBL:CDD11362.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L-asparaginase I
L1_007_000M1_scaffold_338_50
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68856..69659
DNA (804bp) protein (268aa)
Metallo-beta-lactamase domain protein n=3 Tax=Parabacteroides RepID=A7AFW4_9PORP
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDD11361.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
metallo-beta-lactamase superfamily hydrolase
L1_007_000M1_scaffold_338_51
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

70632..71879
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPS7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11360.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_338_52
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

71900..72127
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11359.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_338_53
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

72237..72707
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11358.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_338_54
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

72692..73456
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AIX5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11357.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_338_55
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

73453..73584
DNA (132bp) protein (44aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFW9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11356.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_338_56
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

73680..74354
DNA (675bp) protein (225aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Signal peptidase I n=2 Tax=Parabacteroides RepID=K5ZWI5_9PORP
lepB_5; signal peptidase I
L1_007_000M1_scaffold_338_57
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(74907..75338)
DNA (432bp) protein (144aa)
Ribose-5-phosphate isomerase B n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWN7_9PORP
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CDD11354.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ribose 5-phosphate isomerase B
L1_007_000M1_scaffold_338_58
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75441..77468)
DNA (2028bp) protein (676aa)
Transketolase thiamine diphosphate binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJN9_9PORP
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDD11353.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transketolase
L1_007_000M1_scaffold_338_59
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(77804..78496)
DNA (693bp) protein (231aa)
Hydrolase, NUDIX family n=4 Tax=Parabacteroides RepID=A7AFX3_9PORP
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDN86029.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_338_60
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(78526..79671)
DNA (1146bp) protein (382aa)
Galactokinase n=3 Tax=Parabacteroides RepID=A7AFX4_9PORP
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
galactokinase
Displaying items 31-60 of 87 in total

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