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L1_007_000M1_scaffold_345

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_345_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(399..1352)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYQ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14435.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_345_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1612..2286
DNA (675bp) protein (225aa)
Succinate dehydrogenase cytochrome B subunit, b558 family n=4 Tax=Parabacteroides RepID=A7A9R8_9PORP
Succinate dehydrogenase cytochrome B subunit, b558 family {ECO:0000313|EMBL:EDN88375.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
cytochrome subunit B
L1_007_000M1_scaffold_345_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2325..4268
DNA (1944bp) protein (648aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit n=3 Tax=Parabacteroides RepID=A7A9R7_9PORP
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:EDN88374.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_345_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4296..5051
DNA (756bp) protein (252aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit n=4 Tax=Parabacteroides RepID=A7A9R6_9PORP
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit {ECO:0000313|EMBL:EDN88373.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_345_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5062..5247
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XDM1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14431.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_345_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5244..5402
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AEF2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14430.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_345_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5375..6406)
DNA (1032bp) protein (344aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
tRNA-dihydrouridine synthase n=4 Tax=Parabacteroides RepID=A7A9R4_9PORP
TIM-barrel enzyme
L1_007_000M1_scaffold_345_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6811..8046
DNA (1236bp) protein (412aa)
Collagenase n=2 Tax=Parabacteroides RepID=K6B3N5_9PORP
Peptidase, U32 family {ECO:0000313|EMBL:EDN88365.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
collagenase
L1_007_000M1_scaffold_345_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8046..8453
DNA (408bp) protein (136aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=4 Tax=Parabacteroides RepID=B7B5T7_9PORP
YbgC/YbaW family acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EKN09902.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
thioesterase
L1_007_000M1_scaffold_345_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8450..9565
DNA (1116bp) protein (372aa)
DNA protecting protein DprA n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XDL6_9PORP
DNA protecting protein DprA {ECO:0000313|EMBL:CDD14426.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA processing Smf-like protein
L1_007_000M1_scaffold_345_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9816..10706)
DNA (891bp) protein (297aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BFQ0_9PORP
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:CDD14425.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycerophosphoryl diester phosphodiesterase
L1_007_000M1_scaffold_345_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11314..11676
DNA (363bp) protein (121aa)
Transcriptional regulator, BlaI/MecI/CopY family n=6 Tax=Parabacteroides RepID=A7A9Q4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09905.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transcriptional regulator
L1_007_000M1_scaffold_345_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11697..13433
DNA (1737bp) protein (579aa)
TonB-dependent receptor n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WST3_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:CDD14423.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
outer membrane transport energization protein TonB (TC 2.C.1.1.1)
L1_007_000M1_scaffold_345_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13467..15020
DNA (1554bp) protein (518aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZRY1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14422.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_345_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15054..16259
DNA (1206bp) protein (402aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7A9Q1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14421.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_345_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16266..16841
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYN6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14420.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_345_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17008..19221
DNA (2214bp) protein (738aa)
Phospholipase patatin family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5K8_9PORP
Phospholipase patatin family {ECO:0000313|EMBL:CDD14419.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_345_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19237..19911
DNA (675bp) protein (225aa)
TIGR02453 family protein n=3 Tax=Parabacteroides RepID=A7A9P8_9PORP
TIGR02453 family protein {ECO:0000313|EMBL:EDN88355.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_345_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20377..22152
DNA (1776bp) protein (592aa)
Signal peptide peptidase SppA 67K type n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6D9_9PORP
Signal peptide peptidase SppA 67K type {ECO:0000313|EMBL:CDD11841.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
protease IV
L1_007_000M1_scaffold_345_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22209..22874
DNA (666bp) protein (222aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7A9P5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11843.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_345_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22906..23019
DNA (114bp) protein (38aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BFP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11844.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_345_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23191..23403
DNA (213bp) protein (71aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7A9P3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88350.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
XRE family transcriptional regulator
L1_007_000M1_scaffold_345_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23593..24003
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7A9P1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11846.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_345_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24144..25508)
DNA (1365bp) protein (455aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=3 Tax=Parabacteroides RepID=A7A9P0_9PORP
L1_007_000M1_scaffold_345_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26289..27509
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WY31_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11849.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_345_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27509..28399
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase n=3 Tax=Parabacteroides RepID=A7A9N6_9PORP
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDD11850.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dTDP-4-dehydrorhamnose reductase
L1_007_000M1_scaffold_345_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28518..29528)
DNA (1011bp) protein (337aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Aspartate-semialdehyde dehydrogenase n=2 Tax=Parabacteroides RepID=K5ZRB8_9PORP
aspartate-semialdehyde dehydrogenase
L1_007_000M1_scaffold_345_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29661..32030
DNA (2370bp) protein (790aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7A9N4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88341.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_345_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32039..33166)
DNA (1128bp) protein (376aa)
Clostripain family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WL17_9PORP
Clostripain family {ECO:0000313|EMBL:CDD11853.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
clostripain-like protein
L1_007_000M1_scaffold_345_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33643..34494)
DNA (852bp) protein (284aa)
Transcriptional regulator AraC family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WY36_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD11854.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
Displaying items 1-30 of 48 in total

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