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L1_007_000M1_scaffold_361

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_361_1
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102..299)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J6L5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT28579.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L1_007_000M1_scaffold_361_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

414..629
DNA (216bp) protein (72aa)
AbrB family transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G422_CLOPA
Transcriptional regulator AbrB {ECO:0000313|EMBL:CEQ17610.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
AbrB family transcriptional regulator
L1_007_000M1_scaffold_361_3
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1386..1808
DNA (423bp) protein (141aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWC2_9CLOT
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EEG75747.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L1_007_000M1_scaffold_361_4
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1954..2589
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JTR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62159.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
acetyltransferase
L1_007_000M1_scaffold_361_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3107..4213
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0BFT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51234.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L1_007_000M1_scaffold_361_6
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4346..5719)
DNA (1374bp) protein (458aa)
Magnesium transporter n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C628_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
magnesium transporter
L1_007_000M1_scaffold_361_7
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5855..7990)
DNA (2136bp) protein (712aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJ85_9FIRM
L1_007_000M1_scaffold_361_8
unknown

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comp(8299..8424)
DNA (126bp) protein (42aa)

This feature has no annotations

L1_007_000M1_scaffold_361_9
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8820..10493
DNA (1674bp) protein (558aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
formate--tetrahydrofolate ligase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F0C1
formyltetrahydrofolate synthetase
L1_007_000M1_scaffold_361_10
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

10521..12392
DNA (1872bp) protein (624aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NNH0_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
L1_007_000M1_scaffold_361_11
unknown

Not on your lists

12522..13313
DNA (792bp) protein (264aa)

This feature has no annotations

L1_007_000M1_scaffold_361_12
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15050..15718
DNA (669bp) protein (223aa)
HAD hydrolase family IA variant 3 n=1 Tax=Dorea sp. CAG:317 RepID=R6WCE3_9FIRM
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDD07025.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L1_007_000M1_scaffold_361_13
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16758..18419)
DNA (1662bp) protein (554aa)
ilvD; Dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Dihydroxy-acid dehydratase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6L5_9FIRM
L1_007_000M1_scaffold_361_14
unknown

Not on your lists

18641..20173
DNA (1533bp) protein (511aa)

This feature has no annotations

L1_007_000M1_scaffold_361_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20216..22603
DNA (2388bp) protein (796aa)
Nucleotidase n=1 Tax=Clostridium sp. D5 RepID=F0Z1I9_9CLOT
Nucleotidase {ECO:0000313|EMBL:EGB92291.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L1_007_000M1_scaffold_361_16
Lactobacillus hokkaidonensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22739..23653
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Lactobacillus pobuzihii RepID=UPI00037EFB65
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:BAP84933.1}; TaxID=1193095 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus hokkaidonensis.;"
L1_007_000M1_scaffold_361_17
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

23668..25497
DNA (1830bp) protein (610aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MG97_9FIRM
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDB98678.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_007_000M1_scaffold_361_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25761..26915)
DNA (1155bp) protein (385aa)
Amidohydrolase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QVT5_9CLOT
Amidohydrolase {ECO:0000313|EMBL:CDC37099.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
amidohydrolase
L1_007_000M1_scaffold_361_19
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26921..28015)
DNA (1095bp) protein (365aa)
ApbE family protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GRB9_FILAD
thiamine biosynthesis protein ApbE
Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:EFE28210.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
L1_007_000M1_scaffold_361_20
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28283..29176
DNA (894bp) protein (298aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
Endo-1 4-beta-xylanase n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FDZ1_9FIRM
hypothetical protein
L1_007_000M1_scaffold_361_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29275..32406
DNA (3132bp) protein (1044aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33839.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_000M1_scaffold_361_22
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32514..33782
DNA (1269bp) protein (423aa)
S-layer domain protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PJ55_9FIRM
Iap {ECO:0000313|EMBL:CDN45563.1}; TaxID=483908 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
2', 3'-cyclic nucleotide 2'-phosphodiesterase
L1_007_000M1_scaffold_361_23
unknown

Not on your lists

35060..37363
DNA (2304bp) protein (768aa)

This feature has no annotations

L1_007_000M1_scaffold_361_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37388..37834
DNA (447bp) protein (149aa)
FHA domain containing protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZEL2_9CLOT
FHA domain containing protein {ECO:0000313|EMBL:CCQ97121.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
signal peptide protein
L1_007_000M1_scaffold_361_25
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37865..39118
DNA (1254bp) protein (418aa)
Bacterial cell division membrane protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWV1_CLOCD
Cell cycle protein {ECO:0000313|EMBL:KJF25766.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
cell division membrane protein
L1_007_000M1_scaffold_361_26
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39105..40475
DNA (1371bp) protein (457aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWV0_CLOCD
cell division protein FtsI/penicillin-binding protein 2
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:AEV69811.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_007_000M1_scaffold_361_27
unknown

Not on your lists

comp(41895..42458)
DNA (564bp) protein (188aa)

This feature has no annotations

L1_007_000M1_scaffold_361_28
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

42715..44175
DNA (1461bp) protein (487aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI0002887A05
Cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:CCP25342.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L1_007_000M1_scaffold_361_29
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44323..45183
DNA (861bp) protein (287aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Lachnospiraceae RepID=F7JKI8_9FIRM
L1_007_000M1_scaffold_361_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

45199..45963
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SNT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48272.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
Displaying items 1-30 of 38 in total

View Taxonomy