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L1_007_000M1_scaffold_363

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_363_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(723..1247)
DNA (525bp) protein (175aa)
Glycopeptide antibiotics resistance protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4F1_9FIRM
Glycopeptide antibiotics resistance protein
Glycopeptide antibiotics resistance protein {ECO:0000313|EMBL:CBL26113.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_363_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1313..2695)
DNA (1383bp) protein (461aa)
Putative efflux protein MATE family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P551_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC15849.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_363_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2926..5370)
DNA (2445bp) protein (815aa)
X-X-X-Leu-X-X-Gly heptad repeats n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4E9_9FIRM
X-X-X-Leu-X-X-Gly heptad repeats
X-X-X-Leu-X-X-Gly heptad repeats {ECO:0000313|EMBL:CBL26111.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_363_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5387..7459)
DNA (2073bp) protein (691aa)
Predicted exporters of the RND superfamily n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NXD4_9FIRM
Predicted exporters of the RND superfamily {ECO:0000313|EMBL:CDC15840.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted exporters of the RND superfamily
L1_007_000M1_scaffold_363_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7711..8316
DNA (606bp) protein (202aa)
Transcriptional regulator n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4E7_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL26109.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_363_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8858..9796)
DNA (939bp) protein (313aa)
Lysophospholipase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PBA8_9FIRM
Lysophospholipase {ECO:0000313|EMBL:CDC15836.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Lysophospholipase
L1_007_000M1_scaffold_363_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9807..11177)
DNA (1371bp) protein (457aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4E5_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:CBL26107.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_363_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11360..12232)
DNA (873bp) protein (291aa)
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Clostridiales RepID=D4M4E4_9FIRM
L1_007_000M1_scaffold_363_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12249..13010)
DNA (762bp) protein (254aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase, TatD family {ECO:0000313|EMBL:CBL26105.1}; EC=3.1.21.- {ECO:0000313|EMBL:CBL26105.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Hydrolase, TatD family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4E3_9FIRM
L1_007_000M1_scaffold_363_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13313..15583)
DNA (2271bp) protein (757aa)
Aconitase A (EC:4.2.1.3)
Aconitase A n=2 Tax=Clostridiales RepID=D4M4E2_9FIRM
Aconitase A {ECO:0000313|EMBL:CDC15823.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_363_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15718..16617)
DNA (900bp) protein (300aa)
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q1E9_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CDC15822.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Signal transduction histidine kinase
L1_007_000M1_scaffold_363_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16621..17466)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PB92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC15821.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_363_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17459..18412)
DNA (954bp) protein (318aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NXB3_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDC15820.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type multidrug transport system, ATPase component
L1_007_000M1_scaffold_363_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18464..19150)
DNA (687bp) protein (229aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P515_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC15819.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_363_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19135..20493)
DNA (1359bp) protein (453aa)
Putative efflux protein, MATE family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4D7_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL26099.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_363_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20508..21863)
DNA (1356bp) protein (452aa)
Putative efflux protein MATE family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q1E3_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC15817.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
putative efflux protein, MATE family
L1_007_000M1_scaffold_363_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21924..22799)
DNA (876bp) protein (292aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4D5_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL26097.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_363_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23068..24261)
DNA (1194bp) protein (398aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAF0_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_363_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24386..26503)
DNA (2118bp) protein (706aa)
Elongation factor G n=2 Tax=Ruminococcus lactaris RepID=V8CEG6_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
elongation factor G
L1_007_000M1_scaffold_363_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26525..26995)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=2 Tax=Ruminococcus RepID=R6PGW3_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
30S ribosomal protein S7
L1_007_000M1_scaffold_363_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27207..27626)
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=7 Tax=Clostridiales RepID=D4M4C7_9FIRM
SSU ribosomal protein S12P
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L1_007_000M1_scaffold_363_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27880..29316)
DNA (1437bp) protein (479aa)
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Proline--tRNA ligase n=2 Tax=Clostridiales RepID=D4M4C5_9FIRM
L1_007_000M1_scaffold_363_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29704..30837)
DNA (1134bp) protein (378aa)
Toxic anion resistance protein TelA n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CT55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17719.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Uncharacterized protein involved in tellurite resistance
L1_007_000M1_scaffold_363_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30895..32151)
DNA (1257bp) protein (419aa)
5-bromo-4-chloroindolyl phosphate hydrolysis protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4C2_9FIRM
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
5-bromo-4-chloroindolyl phosphate hydrolysis protein {ECO:0000313|EMBL:CBL26084.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_363_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32266..32934
DNA (669bp) protein (223aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:CBL26083.1}; EC=5.4.99.- {ECO:0000313|EMBL:CBL26083.1};; EC=5.4.99.12 {ECO:0000313|EMBL:CBL26083.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Ribosomal large subunit pseudouridine synthase D n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4C1_9FIRM
L1_007_000M1_scaffold_363_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33059..33349)
DNA (291bp) protein (97aa)
Putative septation protein SpoVG n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4C0_9FIRM
Uncharacterized protein, involved in the regulation of septum location
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_363_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33427..34545)
DNA (1119bp) protein (373aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
ADP-glucose pyrophosphorylase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P023_9FIRM
L1_007_000M1_scaffold_363_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34542..35816)
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAF8_9FIRM
L1_007_000M1_scaffold_363_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36043..37419
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4B7_9FIRM
L1_007_000M1_scaffold_363_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37688..38806
DNA (1119bp) protein (373aa)
DnaD and phage-associated domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4B6_9FIRM
DnaD and phage-associated domain
DnaD and phage-associated domain {ECO:0000313|EMBL:CBL26078.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying items 1-30 of 126 in total

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