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L1_007_000M1_scaffold_374

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_374_1
unknown

Not on your lists

101..265
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

L1_007_000M1_scaffold_374_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(306..734)
-----------------
DNA (429bp)
protein (143aa)
Transcriptional regulator, AraC family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LF19_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EET60758.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000M1_scaffold_374_3
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

1137..2603
-----------------
DNA (1467bp)
protein (489aa)
Ser/Thr phosphatase family protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CL98_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CCX65532.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L1_007_000M1_scaffold_374_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3156..4220
-----------------
DNA (1065bp)
protein (355aa)
Dioxygenases related to 2-nitropropane dioxygenase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2P3_9FIRM
Dioxygenases related to 2-nitropropane dioxygenase
Dioxygenases related to 2-nitropropane dioxygenase {ECO:0000313|EMBL:CBL25505.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_374_5
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4397..4828
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PEK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC16946.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_374_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4825..5583
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC16945.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_374_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5614..6402
-----------------
DNA (789bp)
protein (263aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Clostridiales RepID=D4M2P1_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL25503.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_374_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6498..7163
-----------------
DNA (666bp)
protein (222aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6NXS9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC16943.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_374_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7130..7699
-----------------
DNA (570bp)
protein (190aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q4R1_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDC16942.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
transcriptional regulator
L1_007_000M1_scaffold_374_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8153..9298)
-----------------
DNA (1146bp)
protein (382aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PEJ4_9FIRM
Lactaldehyde reductase {ECO:0000313|EMBL:CDC16941.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_374_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9614..10015
-----------------
DNA (402bp)
protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC16940.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_374_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10153..11736
-----------------
DNA (1584bp)
protein (528aa)
Predicted unusual protein kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2N6_9FIRM
Predicted unusual protein kinase
Predicted unusual protein kinase {ECO:0000313|EMBL:CBL25498.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_374_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12118..13191
-----------------
DNA (1074bp)
protein (358aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2N5_9FIRM
Membrane-associated lipoprotein involved in thiamine biosynthesis
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:CBL25497.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_374_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13226..15004
-----------------
DNA (1779bp)
protein (593aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2N4_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL25496.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_374_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15006..15461
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2N3_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL25495.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_374_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15463..16335
-----------------
DNA (873bp)
protein (291aa)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NQ57_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDC14343.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_374_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16339..16761
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0V9_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC14344.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_374_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16791..17297
-----------------
DNA (507bp)
protein (169aa)
Predicted membrane protein n=2 Tax=Clostridiales RepID=D4M2N1_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL25493.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_374_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17424..20993
-----------------
DNA (3570bp)
protein (1190aa)
FMN-binding domain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P754_9FIRM
FMN-binding domain {ECO:0000313|EMBL:CDC14346.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
FMN-binding domain.
L1_007_000M1_scaffold_374_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21132..21239
-----------------
DNA (108bp)
protein (36aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6PX59_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC14347.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_374_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21599..23128
-----------------
DNA (1530bp)
protein (510aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase, component I {ECO:0000313|EMBL:CBL25490.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CBL25490.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Anthranilate synthase, component I n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2M8_9FIRM
L1_007_000M1_scaffold_374_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23125..23751
-----------------
DNA (627bp)
protein (209aa)
anthranilate synthase, component II (EC:4.1.3.27)
Anthranilate synthase, component II {ECO:0000313|EMBL:CBL25489.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CBL25489.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Anthranilate synthase, component II n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2M7_9FIRM
L1_007_000M1_scaffold_374_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23755..24765
-----------------
DNA (1011bp)
protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0W4_9FIRM
L1_007_000M1_scaffold_374_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24836..25645
-----------------
DNA (810bp)
protein (270aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSZ9_9FIRM
L1_007_000M1_scaffold_374_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25659..26330
-----------------
DNA (672bp)
protein (224aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2M4_9FIRM
L1_007_000M1_scaffold_374_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26381..27565
-----------------
DNA (1185bp)
protein (395aa)
tryptophan synthase, beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBL25485.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Tryptophan synthase beta chain n=2 Tax=Clostridiales RepID=D4M2M3_9FIRM
L1_007_000M1_scaffold_374_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27558..28328
-----------------
DNA (771bp)
protein (257aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NQ65_9FIRM
L1_007_000M1_scaffold_374_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28472..28840
-----------------
DNA (369bp)
protein (123aa)
undecaprenol kinase (EC:2.7.1.66 2.7.1.107)
Undecaprenol kinase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0W9_9FIRM
Undecaprenol kinase {ECO:0000313|EMBL:CDC14354.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_374_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28876..29652
-----------------
DNA (777bp)
protein (259aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2M0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25482.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_374_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29959..32163
-----------------
DNA (2205bp)
protein (735aa)
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2L9_9FIRM
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1) {ECO:0000313|EMBL:CBL25481.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
Displaying items 1-30 of 61 in total

View Taxonomy