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L1_007_000M1_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_379_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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63..1253
DNA (1191bp) protein (397aa)
TraG/TraD family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Z8_9ACTN
TraG/TraD family protein {ECO:0000313|EMBL:EBA39666.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
conjugation protein TrsK
L1_007_000M1_scaffold_379_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1264..2202
DNA (939bp) protein (313aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Z9_9ACTN
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EBA39667.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_007_000M1_scaffold_379_3
unknown

Not on your lists

comp(2114..2629)
DNA (516bp) protein (172aa)

This feature has no annotations

L1_007_000M1_scaffold_379_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2648..5473)
DNA (2826bp) protein (942aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA01_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39669.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DNA methyltransferase
L1_007_000M1_scaffold_379_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6216..6614)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4EA02_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35114.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L1_007_000M1_scaffold_379_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6735..7655)
DNA (921bp) protein (307aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA03_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72392.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system transporter subunit IID
L1_007_000M1_scaffold_379_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7672..8490)
DNA (819bp) protein (273aa)
PTS system sorbose-specific iic component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA04_9ACTN
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EBA39672.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS sorbose-specific transporter subunit IIC
L1_007_000M1_scaffold_379_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8509..9498)
DNA (990bp) protein (330aa)
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EBA39673.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EBA39673.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS system, mannose/fructose/sorbose family, IIB component n=2 Tax=Collinsella RepID=A4EA05_9ACTN
PTS system, mannose/fructose/sorbose family, IIB component
L1_007_000M1_scaffold_379_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9904..10332)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA29_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36528.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hydrogenase nickel incorporation protein HypA
L1_007_000M1_scaffold_379_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10363..13140)
DNA (2778bp) protein (926aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A615_9ACTN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDA36527.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L1_007_000M1_scaffold_379_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13311..13991
DNA (681bp) protein (227aa)
Transcriptional regulator TetR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQB4_9ACTN
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDA36526.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
TetR family transcriptional regulator
L1_007_000M1_scaffold_379_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14055..15062
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA10_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72783.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_007_000M1_scaffold_379_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15296..16792
DNA (1497bp) protein (499aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA11_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39679.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L1_007_000M1_scaffold_379_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16866..18218)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA12_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39680.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Predicted ATPase (AAA+ superfamily)
L1_007_000M1_scaffold_379_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18540..18743)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA13_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72781.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L1_007_000M1_scaffold_379_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18877..21504)
DNA (2628bp) protein (876aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA14_9ACTN
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ATP-dependent chaperone ClpB
L1_007_000M1_scaffold_379_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21952..22662)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCE9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36520.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_007_000M1_scaffold_379_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22858..23526
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIW5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36519.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L1_007_000M1_scaffold_379_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23799..26099)
DNA (2301bp) protein (767aa)
Aconitase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73630.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aconitase protein
L1_007_000M1_scaffold_379_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26373..26789)
DNA (417bp) protein (139aa)
Transcriptional regulator, MerR family n=2 Tax=Collinsella RepID=A4EA19_9ACTN
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EBA39687.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
MerR family transcriptional regulator
L1_007_000M1_scaffold_379_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26862..27827)
DNA (966bp) protein (322aa)
DnaJ domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQA5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74135.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
chaperone DnaJ domain-containing protein
L1_007_000M1_scaffold_379_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27936..28778)
DNA (843bp) protein (281aa)
Protein GrpE n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA21_9ACTN
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GrpE protein HSP-70 cofactor
L1_007_000M1_scaffold_379_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28781..30673)
DNA (1893bp) protein (631aa)
chaperone protein DnaK (EC:3.6.1.3)
Chaperone protein DnaK n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA22_9ACTN
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_007_000M1_scaffold_379_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31330..31515
DNA (186bp) protein (62aa)
4Fe-4S binding domain protein n=2 Tax=Collinsella RepID=A4EA25_9ACTN
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDA36513.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L1_007_000M1_scaffold_379_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31608..32153)
DNA (546bp) protein (182aa)
3H domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA26_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74131.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Predicted small molecule binding protein (contains 3H domain)
L1_007_000M1_scaffold_379_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32153..33013)
DNA (861bp) protein (287aa)
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQ99_9ACTN
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:CDA36511.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
nicotinate-nucleotide pyrophosphorylase
L1_007_000M1_scaffold_379_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33017..34393)
DNA (1377bp) protein (459aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA28_9ACTN
FAD binding domain protein {ECO:0000313|EMBL:EBA39696.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L1_007_000M1_scaffold_379_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34450..35475)
DNA (1026bp) protein (342aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Quinolinate synthetase complex A subunit n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIV1_9ACTN
quinolinate synthetase A
L1_007_000M1_scaffold_379_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35768..36490
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA14_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74127.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulator of the LytR/AlgR family
L1_007_000M1_scaffold_379_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36490..37767
DNA (1278bp) protein (426aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA31_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39699.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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