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L1_007_000M1_scaffold_409

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_409_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(203..688)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1E8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25060.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_409_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(895..1524)
DNA (630bp) protein (210aa)
Predicted membrane protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1E5_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL25057.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_409_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1528..3771)
DNA (2244bp) protein (748aa)
Alpha-galactosidase {ECO:0000313|EMBL:CBL25056.1}; EC=3.2.1.22 {ECO:0000313|EMBL:CBL25056.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1E4_9FIRM
L1_007_000M1_scaffold_409_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3805..5223)
DNA (1419bp) protein (473aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1E3_9FIRM
sugar (Glycoside-Pentoside-Hexuronide) transporter
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CBL25055.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_409_5
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5401..6318)
DNA (918bp) protein (306aa)
Transcriptional regulator, AraC family n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BFD5_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG87980.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
AraC-like ligand binding domain.
L1_007_000M1_scaffold_409_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6546..7949
DNA (1404bp) protein (468aa)
Amino acid carrier protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1E0_9FIRM
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:CBL25052.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_409_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8054..8938)
DNA (885bp) protein (295aa)
Predicted transcriptional regulators n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D9_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL25051.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_409_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9055..11046)
DNA (1992bp) protein (664aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CBL25050.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CBL25050.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Alpha-glucosidases, family 31 of glycosyl hydrolases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D8_9FIRM
L1_007_000M1_scaffold_409_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11043..12731)
DNA (1689bp) protein (563aa)
Glycosidases {ECO:0000313|EMBL:CBL25049.1}; EC=3.2.1.10 {ECO:0000313|EMBL:CBL25049.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Glycosidases (EC:3.2.1.10)
Glycosidases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D7_9FIRM
L1_007_000M1_scaffold_409_10
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12934..13941)
DNA (1008bp) protein (336aa)
Transcriptional regulator LacI family n=2 Tax=root RepID=R6LKF4_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDB86380.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Transcriptional regulators
L1_007_000M1_scaffold_409_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14224..15096
DNA (873bp) protein (291aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6X1_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC17702.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_409_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15221..16720)
DNA (1500bp) protein (500aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGV1_9FIRM
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:CDC17701.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
L1_007_000M1_scaffold_409_13
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16717..17091)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R8E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF46353.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Signal transduction histidine kinase
L1_007_000M1_scaffold_409_14
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(17049..18104)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XIF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15288.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Signal transduction histidine kinase
L1_007_000M1_scaffold_409_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18091..18909)
DNA (819bp) protein (273aa)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D4_9FIRM
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBL25046.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_409_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19384..19776
DNA (393bp) protein (131aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6S3_9FIRM
L1_007_000M1_scaffold_409_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19871..20710
DNA (840bp) protein (280aa)
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBL25044.1}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBL25044.1};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Pantothenate synthetase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D2_9FIRM
L1_007_000M1_scaffold_409_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20714..21688
DNA (975bp) protein (325aa)
Predicted Na+-dependent transporter n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D1_9FIRM
Predicted Na+-dependent transporter
Predicted Na+-dependent transporter {ECO:0000313|EMBL:CBL25043.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_409_19
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(21762..23156)
DNA (1395bp) protein (465aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XI09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15143.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L1_007_000M1_scaffold_409_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23174..24625)
DNA (1452bp) protein (484aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8N5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDP22367.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Signal transduction histidine kinase
L1_007_000M1_scaffold_409_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24768..26825)
DNA (2058bp) protein (686aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL25042.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
hypothetical protein
L1_007_000M1_scaffold_409_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27204..28079)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1C9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25041.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_409_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28102..29391)
DNA (1290bp) protein (430aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase {ECO:0000313|EMBL:CBL25040.1}; EC=6.1.1.11 {ECO:0000313|EMBL:CBL25040.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Seryl-tRNA synthetase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1C8_9FIRM
L1_007_000M1_scaffold_409_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29431..29934)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC16273.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_409_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29951..30871)
DNA (921bp) protein (307aa)
ParB-like partition proteins n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P6H3_9FIRM
ParB-like partition proteins {ECO:0000313|EMBL:CDC16274.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ParB-like partition proteins
L1_007_000M1_scaffold_409_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30874..31644)
DNA (771bp) protein (257aa)
ATPases involved in chromosome partitioning n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYL7_9FIRM
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CDC16275.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ATPases involved in chromosome partitioning
L1_007_000M1_scaffold_409_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32184..33152
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZ25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17388.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_409_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33402..34127)
DNA (726bp) protein (242aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q614_9FIRM
L1_007_000M1_scaffold_409_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34242..36134)
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1C5_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
glucose-inhibited division protein A
L1_007_000M1_scaffold_409_30
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36100..37488)
DNA (1389bp) protein (463aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
tRNA modification GTPase MnmE n=2 Tax=Clostridiales RepID=D4M1C4_9FIRM
tRNA modification GTPase trmE
Displaying items 1-30 of 42 in total

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