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L1_007_000M1_scaffold_435

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_435_1
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(494..8143)
DNA (7650bp) protein (2550aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q7C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17847.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
conserved repeat domain
L1_007_000M1_scaffold_435_2
unknown

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comp(8621..9226)
DNA (606bp) protein (202aa)

This feature has no annotations

L1_007_000M1_scaffold_435_3
unknown

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comp(9228..9419)
DNA (192bp) protein (64aa)

This feature has no annotations

L1_007_000M1_scaffold_435_4
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9675..10991)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KZV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY70634.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
Glycosidases
L1_007_000M1_scaffold_435_5
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11170..12204)
DNA (1035bp) protein (345aa)
Zinc finger/helix-turn-helix protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LVV1_9FIRM
Zinc finger/helix-turn-helix protein {ECO:0000313|EMBL:EHO51998.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L1_007_000M1_scaffold_435_6
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12234..12638)
DNA (405bp) protein (135aa)
Toxin-antitoxin system toxin component domain protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LBW7_9FIRM
Toxin-antitoxin system toxin component domain protein {ECO:0000313|EMBL:CCY76633.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
L1_007_000M1_scaffold_435_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13208..14656)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZH1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48462.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
flotillin
L1_007_000M1_scaffold_435_8
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14818..15951)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GAY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18774.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
PPIC-type PPIASE domain.
L1_007_000M1_scaffold_435_9
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16051..18324)
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MG35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69763.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
TRAG family protein
L1_007_000M1_scaffold_435_10
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18315..19853)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MG35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69763.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
TraG family protein
L1_007_000M1_scaffold_435_11
unknown

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comp(19874..21319)
DNA (1446bp) protein (482aa)

This feature has no annotations

L1_007_000M1_scaffold_435_12
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21439..22527)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MDF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68833.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L1_007_000M1_scaffold_435_13
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22560..24632)
DNA (2073bp) protein (691aa)
ATP-dependent exoDNAse (exonuclease V), alpha subunit-helicase superfamily I member (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MM06_9FIRM
RecD/TraA family helicase {ECO:0000313|EMBL:EOS68832.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L1_007_000M1_scaffold_435_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24740..25399
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MDU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68831.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L1_007_000M1_scaffold_435_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25420..29256)
DNA (3837bp) protein (1279aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MCV7_9FIRM
L1_007_000M1_scaffold_435_16
unknown

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comp(29207..29377)
DNA (171bp) protein (57aa)

This feature has no annotations

L1_007_000M1_scaffold_435_17
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29394..30665)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MCS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68829.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L1_007_000M1_scaffold_435_18
unknown

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comp(30668..31078)
DNA (411bp) protein (137aa)

This feature has no annotations

L1_007_000M1_scaffold_435_19
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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comp(31096..33456)
DNA (2361bp) protein (787aa)
AGAP002737-PA (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7QCP0_ANOGA
Viral A-type inclusion protein, putative {ECO:0000313|EMBL:EAY05939.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
L1_007_000M1_scaffold_435_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(33594..34310)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43903.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L1_007_000M1_scaffold_435_21
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34420..35493
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MDE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68823.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Guanylate kinase
L1_007_000M1_scaffold_435_22
unknown

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35490..36005
DNA (516bp) protein (172aa)

This feature has no annotations

L1_007_000M1_scaffold_435_23
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36035..36553)
DNA (519bp) protein (173aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Signal peptidase I n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IA86_9CLOT
signal peptidase I
L1_007_000M1_scaffold_435_24
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(36543..37235)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7II33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50988.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L1_007_000M1_scaffold_435_25
unknown

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comp(37283..37528)
DNA (246bp) protein (82aa)

This feature has no annotations

L1_007_000M1_scaffold_435_26
Alloiococcus otitis, Alloiococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(37699..38187)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Alloiococcus otitis ATCC 51267 RepID=K9EC75_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EKU93386.1}; TaxID=883081 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alloiococcus.;" source="Alloiococcus otitis ATCC 51267.;"
Gp157 family protein
L1_007_000M1_scaffold_435_27
unknown

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comp(38200..39273)
DNA (1074bp) protein (358aa)

This feature has no annotations

L1_007_000M1_scaffold_435_28
unknown

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comp(39391..39654)
DNA (264bp) protein (88aa)

This feature has no annotations

L1_007_000M1_scaffold_435_29
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39827..41416
DNA (1590bp) protein (530aa)
recJ2; ssDNA exonuclease RecJ2 (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MD59_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EOS68753.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L1_007_000M1_scaffold_435_30
unknown

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comp(41450..41608)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

View Taxonomy