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L1_007_000M1_scaffold_444

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_444_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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373..639
DNA (267bp) protein (89aa)
Prevent-host-death family protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0J2_9FIRM
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:CBL27552.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_444_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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643..957
DNA (315bp) protein (105aa)
Plasmid stabilisation system protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0J3_9FIRM
Plasmid stabilisation system protein.
Plasmid stabilisation system protein {ECO:0000313|EMBL:CBL27553.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_444_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1171..2103
DNA (933bp) protein (311aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Cysteine synthase A n=2 Tax=Clostridiales RepID=D4M0J4_9FIRM
L1_007_000M1_scaffold_444_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2218..3525
DNA (1308bp) protein (436aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CBL27555.1}; EC=2.5.1.49 {ECO:0000313|EMBL:CBL27555.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
O-acetylhomoserine sulfhydrolase n=2 Tax=Clostridiales RepID=D4M0J5_9FIRM
L1_007_000M1_scaffold_444_5
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3606..4049
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17623.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
BadM/Rrf2 family transcriptional regulator
L1_007_000M1_scaffold_444_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4084..5235
DNA (1152bp) protein (384aa)
Cystathionine beta-lyases/cystathionine gamma-synthases (EC:2.5.1.48)
Cystathionine beta-lyases/cystathionine gamma-synthases {ECO:0000313|EMBL:CBL27556.1}; EC=2.5.1.48 {ECO:0000313|EMBL:CBL27556.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Cystathionine beta-lyases/cystathionine gamma-synthases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0J6_9FIRM
L1_007_000M1_scaffold_444_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5247..6440
DNA (1194bp) protein (398aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities (EC:2.6.1.-)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities {ECO:0000313|EMBL:CBL27557.1}; EC=2.6.1.- {ECO:0000313|EMBL:CBL27557.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0J7_9FIRM
L1_007_000M1_scaffold_444_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6567..6995)
DNA (429bp) protein (143aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0J8_9FIRM
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CBL27558.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_444_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7334..8059
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0J9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27559.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_444_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8079..8888
DNA (810bp) protein (270aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1S8_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDC17400.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_444_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9013..11088
DNA (2076bp) protein (692aa)
Predicted exporters of the RND superfamily n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PFZ0_9FIRM
Predicted exporters of the RND superfamily {ECO:0000313|EMBL:CDC17401.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted exporters of the RND superfamily
L1_007_000M1_scaffold_444_12
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11407..12297
DNA (891bp) protein (297aa)
Abortive infection bacteriophage resistance protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K175_9CLOT
Abortive infection bacteriophage resistance protein {ECO:0000313|EMBL:CDE70040.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L1_007_000M1_scaffold_444_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12521..12619
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0K2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27562.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_444_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12906..14390
DNA (1485bp) protein (495aa)
L-fucose isomerase and related proteins n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0K3_9FIRM
L-fucose isomerase and related proteins
L-fucose isomerase and related proteins {ECO:0000313|EMBL:CBL27563.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_444_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14478..15950
DNA (1473bp) protein (491aa)
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2Q7_9FIRM
Xylulokinase {ECO:0000313|EMBL:CDC14989.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_444_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16219..16950
DNA (732bp) protein (244aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T9Q7_CLOSG
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22998.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
LytTr DNA-binding domain-containing protein
L1_007_000M1_scaffold_444_17
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16940..18232
DNA (1293bp) protein (431aa)
Signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4H9_CLOSW
signal transduction histidine kinase regulating citrate/malate metabolism
Signal transduction histidine kinase regulating citrate/malate metabolism {ECO:0000313|EMBL:ADL05049.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_007_000M1_scaffold_444_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18367..18774
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C2H1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45973.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_007_000M1_scaffold_444_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18934..19824)
DNA (891bp) protein (297aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NS27_9FIRM
L1_007_000M1_scaffold_444_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20144..20839
DNA (696bp) protein (232aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=Clostridiales RepID=D4M0K6_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC14987.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_444_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20904..23627
DNA (2724bp) protein (908aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P8Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14986.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Signal transduction histidine kinase
L1_007_000M1_scaffold_444_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24273..26174
DNA (1902bp) protein (634aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Methionine--tRNA ligase n=2 Tax=Clostridiales RepID=D4M0K8_9FIRM
L1_007_000M1_scaffold_444_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26390..26479
DNA (90bp) protein (30aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0K9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27569.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_444_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26967..30137
DNA (3171bp) protein (1057aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14984.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L1_007_000M1_scaffold_444_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30378..32303
DNA (1926bp) protein (642aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PZ47_9FIRM
L1_007_000M1_scaffold_444_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32410..32673
DNA (264bp) protein (88aa)
Stage III sporulation protein D n=2 Tax=Clostridiales RepID=D4M0L1_9FIRM
Stage III sporulation protein D.
Stage III sporulation protein D {ECO:0000313|EMBL:CBL27571.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_007_000M1_scaffold_444_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32739..34268
DNA (1530bp) protein (510aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PZ42_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CDC14977.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_000M1_scaffold_444_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34443..34670
DNA (228bp) protein (76aa)
PTS HPr component phosphorylation site n=2 Tax=Clostridiales RepID=D4M0L4_9FIRM
PTS HPr component phosphorylation site.
PTS HPr component phosphorylation site {ECO:0000313|EMBL:CDC14975.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_000M1_scaffold_444_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35009..36556
DNA (1548bp) protein (516aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NS17_9FIRM
L1_007_000M1_scaffold_444_30
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36665..37096)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YEY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55997.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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