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L1_007_000M1_scaffold_471

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_471_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..240)
DNA (240bp) protein (80aa)
Transposase n=3 Tax=root RepID=C0FXS3_9FIRM
hypothetical protein
Transposase {ECO:0000313|EMBL:EEG92608.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L1_007_000M1_scaffold_471_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1223..1945)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HPL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30024.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L1_007_000M1_scaffold_471_3
unknown

Not on your lists

comp(1951..2082)
DNA (132bp) protein (44aa)

This feature has no annotations

L1_007_000M1_scaffold_471_4
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

2284..3243
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CFY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX66588.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
hypothetical protein
L1_007_000M1_scaffold_471_5

Not on your lists

3227..3985
DNA (759bp) protein (253aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RW84_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC45820.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_471_6
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4415..4714
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EMU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98454.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L1_007_000M1_scaffold_471_7
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4695..4808
DNA (114bp) protein (38aa)
HI0074 family nucleotidyltransferase substrate binding protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A375_9CLOT
nucleotidyltransferase substrate binding protein, HI0074 family
HI0074 family nucleotidyltransferase substrate binding protein {ECO:0000313|EMBL:EMZ20495.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L1_007_000M1_scaffold_471_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5120..5401
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LF31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60770.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L1_007_000M1_scaffold_471_9

Not on your lists

5385..5582
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RVN2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC45585.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_471_10

Not on your lists

5784..6209
DNA (426bp) protein (142aa)
Transposase IS4 family protein n=1 Tax=gut metagenome RepID=J9GGT4_9ZZZZ
Transposase IS4 family protein {ECO:0000313|EMBL:EJX06637.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
transposase
L1_007_000M1_scaffold_471_11
unknown

Not on your lists

6209..6322
DNA (114bp) protein (38aa)

This feature has no annotations

L1_007_000M1_scaffold_471_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6536..7438
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHK9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93106.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_471_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7602..8039
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79699.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_471_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8095..8355
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79698.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_471_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8419..9237
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VG21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79697.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_471_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9597..10004
DNA (408bp) protein (136aa)
Transcriptional regulator BlaI/MecI/CopY family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8C7_9FIRM
Transcriptional regulator BlaI/MecI/CopY family {ECO:0000313|EMBL:CCZ79696.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Penicillinase repressor.
L1_007_000M1_scaffold_471_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10007..11161
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79695.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_471_18
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11163..11414
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35883.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_007_000M1_scaffold_471_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11475..12521)
DNA (1047bp) protein (349aa)
Glycosyltransferase Family 2 candidate b-glycosyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA78_9FIRM
Glycosyltransferase Family 2 candidate b-glycosyltransferase {ECO:0000313|EMBL:CCZ77587.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glycosyltransferases involved in cell wall biogenesis
L1_007_000M1_scaffold_471_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12622..13179
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77586.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glycopeptide antibiotics resistance protein
L1_007_000M1_scaffold_471_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13176..14294
DNA (1119bp) protein (373aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHV6_9FIRM
UDP-galactopyranose mutase {ECO:0000313|EMBL:CCZ77585.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_471_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14357..15655)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77584.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_471_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15938..16141
DNA (204bp) protein (68aa)
50S ribosomal protein L33 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH58_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LSU ribosomal protein L33P
L1_007_000M1_scaffold_471_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16168..16383
DNA (216bp) protein (72aa)
Protein translocase subunit SecE n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA74_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
protein translocase subunit secE/sec61 gamma
L1_007_000M1_scaffold_471_25
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16401..16919
DNA (519bp) protein (173aa)
Transcription termination/antitermination protein NusG n=2 Tax=environmental samples RepID=R5V2H2_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
transcription antitermination protein nusG
L1_007_000M1_scaffold_471_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16933..17358
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHV1_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LSU ribosomal protein L11P
L1_007_000M1_scaffold_471_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17432..18127
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP97_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
50S ribosomal protein L1
L1_007_000M1_scaffold_471_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18436..18975
DNA (540bp) protein (180aa)
50S ribosomal protein L10 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH55_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
rplJ; 50S ribosomal protein L10
L1_007_000M1_scaffold_471_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19011..19385
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA70_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LSU ribosomal protein L12P
L1_007_000M1_scaffold_471_30
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19623..23561
DNA (3939bp) protein (1313aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCH9_9FIRM
Displaying items 1-30 of 131 in total

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