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L1_007_000M1_scaffold_477

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_477_1
unknown

Not on your lists

comp(501..635)
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_000M1_scaffold_477_2
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(825..1040)
DNA (216bp) protein (72aa)
Signal transduction histidine kinase n=1 Tax=Blautia sp. CAG:52 RepID=R6GEG3_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CDB19626.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
Signal transduction histidine kinase
L1_007_000M1_scaffold_477_3
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1040..2692)
DNA (1653bp) protein (551aa)
Signal transduction histidine kinase n=1 Tax=Blautia sp. CAG:52 RepID=R6GEG3_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CDB19626.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
hypothetical protein
L1_007_000M1_scaffold_477_4
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2696..2893)
DNA (198bp) protein (66aa)
Signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:471 RepID=R7EFK4_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CDE01073.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L1_007_000M1_scaffold_477_5
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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comp(3657..4418)
DNA (762bp) protein (254aa)
Methyltransferase n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZLS2_9FIRM
Methyltransferase {ECO:0000313|EMBL:CDD47040.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
methyltransferase type 11
L1_007_000M1_scaffold_477_6
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4571..4855
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4JBG0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK81681.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_000M1_scaffold_477_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5073..6353)
DNA (1281bp) protein (427aa)
Bacterial Ig-like domain (Group 2) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMB6_9FIRM
Bacterial Ig-like domain (Group 2) {ECO:0000313|EMBL:CCY98137.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Bacterial Ig-like domain (group 2).
L1_007_000M1_scaffold_477_8
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6519..7250)
DNA (732bp) protein (244aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Ribosomal RNA small subunit methyltransferase J n=1 Tax=Blautia sp. CAG:237 RepID=R6LXT2_9FIRM
Protein of unknown function (DUF548).
L1_007_000M1_scaffold_477_9
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7305..7865)
DNA (561bp) protein (187aa)
ADP-ribose pyrophosphatase n=1 Tax=Blautia sp. CAG:237 RepID=R6KPD9_9FIRM
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CDB77033.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
ADP-ribose pyrophosphatase
L1_007_000M1_scaffold_477_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7950..8678)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HTA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32993.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_477_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8675..10078)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HXX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32994.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_477_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10081..10758)
DNA (678bp) protein (226aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HTC3_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY32995.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type multidrug transport system, ATPase component
L1_007_000M1_scaffold_477_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10860..11588)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I8D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32996.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_477_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11585..12475)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32997.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_477_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12477..14063)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HTD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32998.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_477_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14235..15671)
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HY08_9FIRM
Signal transduction histidine kinase
L1_007_000M1_scaffold_477_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15668..16333)
DNA (666bp) protein (222aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HTF2_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCY33000.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_477_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16628..18001)
DNA (1374bp) protein (458aa)
Transporter n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I8E4_9FIRM
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_477_19
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18221..18742
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7U6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33007.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_477_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18933..20744)
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000308EDE5
Uncharacterized protein {ECO:0000313|EMBL:EES76202.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Alcohol acetyltransferase.
L1_007_000M1_scaffold_477_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20748..21686)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76203.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
alpha/beta hydrolase
L1_007_000M1_scaffold_477_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21775..22638)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HY28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33009.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_477_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22732..23832)
DNA (1101bp) protein (367aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAF3_9FIRM
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components {ECO:0000313|EMBL:CCY33776.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_477_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23834..24886)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33777.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type Fe3+-siderophore transport system, permease component
L1_007_000M1_scaffold_477_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24931..26130)
DNA (1200bp) protein (400aa)
Periplasmic binding protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVB8_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:CCY33778.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L1_007_000M1_scaffold_477_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26188..28797)
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I053_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33779.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_477_27
unknown

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28872..29105
DNA (234bp) protein (78aa)

This feature has no annotations

L1_007_000M1_scaffold_477_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29272..30702)
DNA (1431bp) protein (477aa)
Vancomycin resistance protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVL9_9FIRM
Vancomycin resistance protein {ECO:0000313|EMBL:CCY33780.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Uncharacterized vancomycin resistance protein
L1_007_000M1_scaffold_477_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30816..31160)
DNA (345bp) protein (115aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
phosphoribosyl-ATP pyrophosphohydrolase (EC:3.6.1.31 3.5.4.19 4.1.3.-)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9Y0_9FIRM
L1_007_000M1_scaffold_477_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31289..31876)
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00263879};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVC3_9FIRM
Displaying items 1-30 of 48 in total

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