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L1_007_000M1_scaffold_497

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_497_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..388
DNA (387bp) protein (129aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZNN5_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM88481.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
integrase family protein
L1_007_000M1_scaffold_497_2
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

378..1415
DNA (1038bp) protein (346aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZNN6_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM88482.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
integrase family protein
L1_007_000M1_scaffold_497_3
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1456..2208)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87085.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Domain of unknown function (DUF955).
L1_007_000M1_scaffold_497_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2268..3302)
DNA (1035bp) protein (345aa)
Methyltransferase domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTC9_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDM87084.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
DNA methylase
L1_007_000M1_scaffold_497_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3303..4973)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CLM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58139.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
RNA-directed DNA polymerase
L1_007_000M1_scaffold_497_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5552..13072)
DNA (7521bp) protein (2507aa)
DNA methylase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVC6_9FIRM
DNA methylase {ECO:0000313|EMBL:CBL24734.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
DNA methylase
L1_007_000M1_scaffold_497_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13100..15214)
DNA (2115bp) protein (705aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTC8_9FIRM
L1_007_000M1_scaffold_497_8
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15287..15952)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87082.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_000M1_scaffold_497_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15942..16277)
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N9YGU9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ07047.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L1_007_000M1_scaffold_497_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16294..18723)
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9Y542_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07048.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_007_000M1_scaffold_497_11
unknown

Not on your lists

comp(18729..19214)
DNA (486bp) protein (162aa)

This feature has no annotations

L1_007_000M1_scaffold_497_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19165..19935)
DNA (771bp) protein (257aa)
SrtB family sortase n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YFN1_9CLOT
SrtB family sortase {ECO:0000313|EMBL:ENZ07049.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sortase, SrtB family
L1_007_000M1_scaffold_497_13
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19940..20731)
DNA (792bp) protein (264aa)
adenine-specific methyltransferase (EC:2.1.1.72)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Adenine-specific methyltransferase n=2 Tax=Firmicutes RepID=Q1JB82_STRPB
L1_007_000M1_scaffold_497_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20748..23573)
DNA (2826bp) protein (942aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9WVT1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07050.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L1_007_000M1_scaffold_497_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23551..23922)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVC0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24728.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_007_000M1_scaffold_497_16
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23929..24483)
DNA (555bp) protein (185aa)
Transcriptional activator, adenine-specific DNA methyltransferase (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K643_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38942.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L1_007_000M1_scaffold_497_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24500..25369)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YGV6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ07052.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L1_007_000M1_scaffold_497_18
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25397..25609)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87075.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_000M1_scaffold_497_19
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25756..27693)
DNA (1938bp) protein (646aa)
Type IV secretory pathway, VirD4 components n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LV88_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL24696.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_007_000M1_scaffold_497_20
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27690..28208)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LV87_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24695.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_007_000M1_scaffold_497_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28240..28950)
DNA (711bp) protein (237aa)
Replication initiator protein A domain protein n=1 Tax=Clostridium nexile DSM 1787 PF0_9CLOT">RepID=B6FPF0_9CLOT
Replication initiator protein A domain protein {ECO:0000313|EMBL:EEA82085.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Replication initiator protein A (RepA) N-terminus.
L1_007_000M1_scaffold_497_22
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29141..29383)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90725.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L1_007_000M1_scaffold_497_23
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29373..29519)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MSD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02588.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L1_007_000M1_scaffold_497_24
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29614..35514)
DNA (5901bp) protein (1967aa)
Cna protein B-type domain n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LV84_9FIRM
Cna protein B-type domain {ECO:0000313|EMBL:CBL24692.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Cna protein B-type domain.
L1_007_000M1_scaffold_497_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35984..36706)
DNA (723bp) protein (241aa)
Sigma-70, region 4 n=1 Tax=Clostridium nexile DSM 1787 PF5_9CLOT">RepID=B6FPF5_9CLOT
Sigma-70, region 4 {ECO:0000313|EMBL:EEA82090.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
RNA polymerase sigma factor SigB
L1_007_000M1_scaffold_497_26
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

comp(36815..36952)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5R324_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ29036.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
L1_007_000M1_scaffold_497_27
unknown

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comp(37137..37313)
DNA (177bp) protein (59aa)

This feature has no annotations

L1_007_000M1_scaffold_497_28
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37418..38641)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RTH0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY75882.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L1_007_000M1_scaffold_497_29
unknown

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comp(38803..39138)
DNA (336bp) protein (112aa)

This feature has no annotations

L1_007_000M1_scaffold_497_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39242..39415)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B476_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77153.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Displaying items 1-30 of 39 in total

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