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L1_007_000M1_scaffold_500

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_500_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..251)
DNA (249bp) protein (83aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPB1_9FIRM
L1_007_000M1_scaffold_500_2
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(375..1394)
DNA (1020bp) protein (340aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=2 Tax=Clostridiales RepID=A5ZPB2_9FIRM
L1_007_000M1_scaffold_500_3
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1604..2422
DNA (819bp) protein (273aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPB4_9FIRM
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EDM88710.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L1_007_000M1_scaffold_500_4
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2458..4620
DNA (2163bp) protein (721aa)
Glycosidases (EC:2.4.1.4)
Alpha amylase catalytic domain protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DDT9_9FIRM
Alpha amylase catalytic domain protein {ECO:0000313|EMBL:CDD87592.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L1_007_000M1_scaffold_500_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4692..7241)
DNA (2550bp) protein (850aa)
E1-E2 ATPase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPB6_9FIRM
E1-E2 ATPase {ECO:0000313|EMBL:EDM88712.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
L1_007_000M1_scaffold_500_6
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7339..7779)
DNA (441bp) protein (147aa)
Fe-S iron-sulfur cluster assembly protein, NifU family n=2 Tax=Clostridiales RepID=A5ZPB7_9FIRM
Fe-S iron-sulfur cluster assembly protein NifU family {ECO:0000313|EMBL:CDD87590.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L1_007_000M1_scaffold_500_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7858..9045)
DNA (1188bp) protein (396aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPB8_9FIRM
L1_007_000M1_scaffold_500_8
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9076..9510)
DNA (435bp) protein (145aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridiales RepID=A5ZPB9_9FIRM
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDD87589.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
transcriptional regulator, BadM/Rrf2 family
L1_007_000M1_scaffold_500_9
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9637..10941
DNA (1305bp) protein (435aa)
Stage V sporulation protein B n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCF4_9FIRM
Stage V sporulation protein B {ECO:0000313|EMBL:CDD87588.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_007_000M1_scaffold_500_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11128..12159
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPC1_9FIRM
L1_007_000M1_scaffold_500_11
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12207..13091)
DNA (885bp) protein (295aa)
Tyrosine recombinase XerC n=2 Tax=Clostridiales RepID=A5ZPC2_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
tyrosine recombinase XerD subunit
L1_007_000M1_scaffold_500_12
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13278..13871)
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZPC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87585.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L1_007_000M1_scaffold_500_13
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13982..15541)
DNA (1560bp) protein (520aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
Ribonuclease Y n=2 Tax=Clostridiales RepID=R7DAC3_9FIRM
metal dependent phosphohydrolase
L1_007_000M1_scaffold_500_14
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15665..16138)
DNA (474bp) protein (158aa)
Regulatory protein RecX n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCE9_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L1_007_000M1_scaffold_500_15
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16143..17198)
DNA (1056bp) protein (352aa)
Protein RecA n=2 Tax=Clostridiales RepID=A5ZPC8_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
protein RecA
L1_007_000M1_scaffold_500_16
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17367..18815)
DNA (1449bp) protein (483aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase n=2 Tax=Clostridiales RepID=A5ZPC9_9FIRM
L1_007_000M1_scaffold_500_17
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18917..19741)
DNA (825bp) protein (275aa)
Sporulation transcription factor Spo0A n=2 Tax=Clostridiales RepID=A5ZPD0_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
sporulation transcription factor Spo0A
L1_007_000M1_scaffold_500_18
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19872..21074)
DNA (1203bp) protein (401aa)
stage IV sporulation protein B (EC:3.4.21.116)
SpoIVB peptidase n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DAB6_9FIRM
SpoIVB peptidase {ECO:0000313|EMBL:CDD87579.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L1_007_000M1_scaffold_500_19
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21188..22879)
DNA (1692bp) protein (564aa)
DNA repair protein RecN n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCE4_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
DNA replication and repair protein RecN
L1_007_000M1_scaffold_500_20
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22873..23328)
DNA (456bp) protein (152aa)
Arginine repressor n=2 Tax=Clostridiales RepID=R7DDS5_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
transcriptional regulator, ArgR family
L1_007_000M1_scaffold_500_21
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23356..24210)
DNA (855bp) protein (285aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Clostridiales RepID=A5ZPD4_9FIRM
L1_007_000M1_scaffold_500_22
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24227..25036)
DNA (810bp) protein (270aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:EDM88731.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDM88731.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPD5_9FIRM
hemolysin TlyA family protein
L1_007_000M1_scaffold_500_23
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25033..26895)
DNA (1863bp) protein (621aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPD6_9FIRM
L1_007_000M1_scaffold_500_24
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26912..27811)
DNA (900bp) protein (300aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCE0_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:CDD87573.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L1_007_000M1_scaffold_500_25
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27789..28019)
DNA (231bp) protein (77aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Exonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPD9_9FIRM
L1_007_000M1_scaffold_500_26
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28016..29227)
DNA (1212bp) protein (404aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DBF4_9FIRM
L1_007_000M1_scaffold_500_27
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29233..29775)
DNA (543bp) protein (181aa)
N utilization substance protein B homolog n=2 Tax=Clostridiales RepID=A5ZPE1_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
transcription antitermination factor NusB
L1_007_000M1_scaffold_500_28
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29836..30216)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZPE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87569.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L1_007_000M1_scaffold_500_29
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30336..31925)
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCD6_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
peptide chain release factor 3
L1_007_000M1_scaffold_500_30
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32099..32848)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DDR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87567.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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