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L1_007_000M1_scaffold_516

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_516_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

302..520
DNA (219bp) protein (73aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EIJ23365.1}; EC=2.4.-.- {ECO:0000313|EMBL:EIJ23365.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Glycosyltransferase n=4 Tax=Bifidobacterium longum RepID=V6Y391_BIFLN
Glycosyltransferase involved in cell wall biogenesis
L1_007_000M1_scaffold_516_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

529..1209
DNA (681bp) protein (227aa)
Glycosyltransferase n=4 Tax=Bifidobacterium longum RepID=V6Y391_BIFLN
Glycosyltransferase {ECO:0000313|EMBL:ESV34379.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
wcaA3; wcaa3
L1_007_000M1_scaffold_516_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1273..4440)
DNA (3168bp) protein (1056aa)
Glycoside hydrolase, familiy 25 n=1 Tax=Bifidobacterium longum E18 RepID=V6XYN8_BIFLN
Glycoside hydrolase, familiy 25 {ECO:0000313|EMBL:ESV34377.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
glycoside hydrolase
L1_007_000M1_scaffold_516_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4659..6377)
DNA (1719bp) protein (573aa)
Putative DNA binding protein n=1 Tax=Bifidobacterium longum E18 RepID=V6Y0S3_BIFLN
Putative DNA binding protein {ECO:0000313|EMBL:ESV34376.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
transcriptional regulator
L1_007_000M1_scaffold_516_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6751..7779
DNA (1029bp) protein (343aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEI80517.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEI80517.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Glycosyltransferase, group 2 family protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GWH5_BIFLN
hypothetical protein
L1_007_000M1_scaffold_516_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7930..8598
DNA (669bp) protein (223aa)
Glycosyltransferase, group 2 family n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3BKM1_BIFLN
Glycosyltransferase, group 2 family {ECO:0000313|EMBL:EIJ31914.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
glycosyltransferase
L1_007_000M1_scaffold_516_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8972..9274)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=Q8G7P4_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24057.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_000M1_scaffold_516_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9391..9591)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCI3_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70204.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000M1_scaffold_516_9
unknown

Not on your lists

comp(9546..9671)
DNA (126bp) protein (42aa)

This feature has no annotations

L1_007_000M1_scaffold_516_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9671..12076)
DNA (2406bp) protein (802aa)
Phosphoglycerol transferase n=2 Tax=Bifidobacterium longum PF1_BIFLD">RepID=B3DPF1_BIFLD
mdoB2; phosphoglycerol transferase
Phosphoglycerol transferase {ECO:0000313|EMBL:ACD99010.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_000M1_scaffold_516_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12408..12743)
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=Q8G7P6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24055.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_000M1_scaffold_516_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13154..13654)
DNA (501bp) protein (167aa)
Transposase n=2 Tax=Bifidobacterium longum RepID=B3DPE8_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70207.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000M1_scaffold_516_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13917..14705)
DNA (789bp) protein (263aa)
Putative O-acyltransferase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPE6_BIFLD
acyltransferase
Putative O-acyltransferase {ECO:0000313|EMBL:ACD99005.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_000M1_scaffold_516_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14708..15091)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MW70_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67476.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_000M1_scaffold_516_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15091..17241)
DNA (2151bp) protein (717aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPE5_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:ACD99004.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
hypothetical protein
L1_007_000M1_scaffold_516_16
unknown

Not on your lists

comp(17924..18097)
DNA (174bp) protein (58aa)

This feature has no annotations

L1_007_000M1_scaffold_516_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18472..19038
DNA (567bp) protein (189aa)
MacB-like periplasmic core domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AW43_BIFLN
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:EIJ23336.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
SalY-type ABC antimicrobial peptide transport system permease component
L1_007_000M1_scaffold_516_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19035..20156
DNA (1122bp) protein (374aa)
ABC transporter ATP-binding component n=2 Tax=Bifidobacterium longum RepID=E8MFK2_BIFL2
ABC transporter ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAJ67479.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_000M1_scaffold_516_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20280..20984
DNA (705bp) protein (235aa)
HD domain protein n=13 Tax=Bifidobacterium RepID=C5ECV1_BIFLI
hypothetical protein
Phosphohydrolase {ECO:0000313|EMBL:KEY20685.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_000M1_scaffold_516_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21060..21920)
DNA (861bp) protein (287aa)
Glutamine amidotransferases class-II n=5 Tax=Bifidobacterium RepID=I3AWD5_BIFLN
glutamine amidotransferase
Glutamine amidotransferases class-II {ECO:0000313|EMBL:EIJ23428.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_000M1_scaffold_516_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22014..24527)
DNA (2514bp) protein (838aa)
Probable potassium transport system protein kup n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3B3E9_BIFLN
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
K+ transporter
L1_007_000M1_scaffold_516_22
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24670..25629)
DNA (960bp) protein (320aa)
Mg-dependent DNase (EC:3.1.21.-)
Mg-dependent DNase n=10 Tax=Bifidobacterium RepID=D6DCJ3_BIFLN
TatD family hydrolase {ECO:0000313|EMBL:EFV37324.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_000M1_scaffold_516_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25909..26979
DNA (1071bp) protein (357aa)
Fic/DOC family protein n=4 Tax=Bifidobacterium RepID=E5XYJ4_9BIFI
hypothetical protein
Cell division protein Fic {ECO:0000313|EMBL:KEY32280.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_000M1_scaffold_516_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26908..27225)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7Q6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24045.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_000M1_scaffold_516_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27419..27724
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5ECV8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55852.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_000M1_scaffold_516_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27592..28518)
DNA (927bp) protein (309aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=9 Tax=Bifidobacterium RepID=D6DCJ5_BIFLN
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK70216.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000M1_scaffold_516_27
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28515..29468)
DNA (954bp) protein (318aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=7 Tax=Bifidobacterium RepID=D6DCJ6_BIFLN
sugar permease of ABC transporter system
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EFV37320.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_000M1_scaffold_516_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29607..30923)
DNA (1317bp) protein (439aa)
MalE-type ABC sugar transport system periplasmic component n=7 Tax=Bifidobacterium RepID=B3DPD4_BIFLD
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEI80500.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_000M1_scaffold_516_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31133..31252
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3B3E2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ31919.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_000M1_scaffold_516_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31347..32381)
DNA (1035bp) protein (345aa)
Predicted beta-xylosidase n=4 Tax=Bifidobacterium longum RepID=D6DCJ8_BIFLN
beta-xylosidase
Predicted beta-xylosidase {ECO:0000313|EMBL:CBK70219.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Displaying items 1-30 of 59 in total

View Taxonomy