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L1_007_000M1_scaffold_522

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_522_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(134..397)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85261.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_522_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

662..1075
DNA (414bp) protein (138aa)
Response regulator receiver domain protein n=2 Tax=Parabacteroides RepID=R6XZH9_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:CDD11617.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system response regulator
L1_007_000M1_scaffold_522_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1379..1654
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B344_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:CDD11610.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
histone-like protein
L1_007_000M1_scaffold_522_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1824..2888)
DNA (1065bp) protein (355aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
3-dehydroquinate synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WKD6_9PORP
3-dehydroquinate synthase
L1_007_000M1_scaffold_522_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3059..5686)
DNA (2628bp) protein (876aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=2 Tax=Parabacteroides merdae RepID=A7AIQ1_9PORP
L1_007_000M1_scaffold_522_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5784..6767
DNA (984bp) protein (328aa)
Peptidase, M23 family n=3 Tax=Parabacteroides RepID=A7AIQ2_9PORP
Peptidase, M23 family {ECO:0000313|EMBL:EDN85269.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
peptidase
L1_007_000M1_scaffold_522_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6783..7139
DNA (357bp) protein (119aa)
Transcriptional regulator, MerR family n=6 Tax=Parabacteroides RepID=A7AIQ3_9PORP
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDN85270.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L1_007_000M1_scaffold_522_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7227..7622
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AIQ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13875.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L1_007_000M1_scaffold_522_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7717..9975)
DNA (2259bp) protein (753aa)
RelA/SpoT family protein n=2 Tax=Parabacteroides RepID=K5ZQT4_9PORP
RelA/SpoT family protein {ECO:0000313|EMBL:CDD14341.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
L1_007_000M1_scaffold_522_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10097..11647)
DNA (1551bp) protein (517aa)
LysM domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYE3_9PORP
LysM domain protein {ECO:0000313|EMBL:CDD14340.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L1_007_000M1_scaffold_522_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11652..12410)
DNA (759bp) protein (253aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIQ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14339.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_522_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12407..13294)
DNA (888bp) protein (296aa)
ParB-like protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSL0_9PORP
ParB-like protein {ECO:0000313|EMBL:CDD14338.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
chromosome partitioning protein ParB
L1_007_000M1_scaffold_522_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13374..14138)
DNA (765bp) protein (255aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=3 Tax=Parabacteroides merdae RepID=A7AIQ9_9PORP
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EDN85276.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ParaA family ATPase
L1_007_000M1_scaffold_522_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14328..14636)
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIR0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14517.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative toxin-antitoxin system toxin component, PIN family
L1_007_000M1_scaffold_522_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15330..18512
DNA (3183bp) protein (1061aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AIR2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85279.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_522_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18874..19209
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIR4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14489.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_522_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19241..19336
DNA (96bp) protein (32aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6ADU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14490.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_522_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19395..21662
DNA (2268bp) protein (756aa)
VirE N-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7AIR5_9PORP
VirE N-terminal domain protein {ECO:0000313|EMBL:EDN85282.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
VirE protein
L1_007_000M1_scaffold_522_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21959..22405
DNA (447bp) protein (149aa)
Putative DNA-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y7W9_9PORP
Putative DNA-binding protein {ECO:0000313|EMBL:CDD14492.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_522_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22515..22739)
DNA (225bp) protein (75aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A7AIR9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10093.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L1_007_000M1_scaffold_522_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22813..23313
DNA (501bp) protein (167aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=3 Tax=Parabacteroides RepID=A7AIS0_9PORP
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EDN85287.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L1_007_000M1_scaffold_522_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23329..23676
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14495.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_522_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23684..24037)
DNA (354bp) protein (118aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZE10_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14496.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_522_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24140..25054)
DNA (915bp) protein (305aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y803_9PORP
L1_007_000M1_scaffold_522_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25338..26492)
DNA (1155bp) protein (385aa)
Putative cytochrome d ubiquinol oxidase subunit II n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WT49_9PORP
Putative cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:CDD14498.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cytochrome D ubiquinol oxidase subunit II
L1_007_000M1_scaffold_522_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26526..28076)
DNA (1551bp) protein (517aa)
Gram-positive signal peptide protein YSIRK family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5X5_9PORP
Gram-positive signal peptide protein YSIRK family {ECO:0000313|EMBL:CDD14499.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cytochrome D ubiquinol oxidase subunit I
L1_007_000M1_scaffold_522_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28089..28412)
DNA (324bp) protein (108aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIS7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14500.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_522_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28604..30076
DNA (1473bp) protein (491aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=A7AIS8_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD14501.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dehydrogenase
L1_007_000M1_scaffold_522_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30100..30954
DNA (855bp) protein (285aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIS9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85296.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_522_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31044..32183)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WT60_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14503.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
Displaying items 1-30 of 60 in total

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