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L1_007_000M1_scaffold_523

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_523_1
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..346
DNA (345bp) protein (115aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
V-type ATPase 116kDa subunit family protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAE8_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_2
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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343..828
DNA (486bp) protein (162aa)
ATP synthase subunit C. (EC:3.6.3.14)
ATP synthase subunit C n=1 Tax=Dorea sp. CAG:105 RepID=R5D6I3_9FIRM
ATP synthase subunit C {ECO:0000313|EMBL:CCX75783.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_3
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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851..1444
DNA (594bp) protein (198aa)
Archaeal/vacuolar-type H+-ATPase subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E n=1 Tax=Dorea sp. CAG:105 RepID=R5DG17_9FIRM
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_4
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1466..2434
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DIL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75781.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_523_5
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2427..2747
DNA (321bp) protein (107aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75780.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_6
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2776..4542
DNA (1767bp) protein (589aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Dorea sp. CAG:105 RepID=R5DAE3_9FIRM
L1_007_000M1_scaffold_523_7
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4545..5918
DNA (1374bp) protein (458aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Dorea sp. CAG:105 RepID=R5D6H9_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_8
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5947..6606
DNA (660bp) protein (220aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Dorea sp. CAG:105 RepID=R5DG10_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_9
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6705..7628
DNA (924bp) protein (308aa)
Transcriptional regulator LysR family n=1 Tax=Dorea sp. CAG:105 RepID=R5DIK7_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCX75776.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
LysR family transcriptional regulator
L1_007_000M1_scaffold_523_10
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7785..8009
DNA (225bp) protein (75aa)
NADH:ubiquinone oxidoreductase 24 kD subunit (EC:1.6.5.3)
Respiratory-chain NADH dehydrogenase 24 Kd subunit n=1 Tax=Dorea sp. CAG:105 RepID=R5D6C0_9FIRM
Respiratory-chain NADH dehydrogenase 24 Kd subunit {ECO:0000313|EMBL:CCX75775.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_11
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7993..8289
DNA (297bp) protein (99aa)
NADH:ubiquinone oxidoreductase 24 kD subunit (EC:1.6.5.3)
Respiratory-chain NADH dehydrogenase 24 Kd subunit n=1 Tax=Dorea sp. CAG:105 RepID=R5D6C0_9FIRM
Respiratory-chain NADH dehydrogenase 24 Kd subunit {ECO:0000313|EMBL:CCX75775.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_12
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8291..10159
DNA (1869bp) protein (623aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit (EC:1.6.5.3)
4Fe-4S binding domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAD8_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCX75774.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_13
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10171..10497
DNA (327bp) protein (109aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenase Fe-only n=1 Tax=Dorea sp. CAG:105 RepID=R5D6H5_9FIRM
Hydrogenase Fe-only {ECO:0000313|EMBL:CCX75773.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_14
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10522..11874
DNA (1353bp) protein (451aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenase Fe-only n=1 Tax=Dorea sp. CAG:105 RepID=R5D6H5_9FIRM
Hydrogenase Fe-only {ECO:0000313|EMBL:CCX75773.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_15
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11953..12381
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DG04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75772.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_523_16
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12652..13167
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=2 Tax=Coprococcus RepID=C0B9X7_9FIRM
L1_007_000M1_scaffold_523_17
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13338..14630
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Dorea sp. CAG:105 RepID=R5D6B5_9FIRM
L1_007_000M1_scaffold_523_18
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14968..16155
DNA (1188bp) protein (396aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Dorea sp. CAG:105 RepID=R5DAD3_9FIRM
L1_007_000M1_scaffold_523_19
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16233..17729
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6H0_9FIRM
Signal transduction histidine kinase
L1_007_000M1_scaffold_523_20
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17722..18411
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DFZ8_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX75767.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_523_21
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18503..19306
DNA (804bp) protein (268aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Dorea sp. CAG:105 RepID=R5DIJ3_9FIRM
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CCX75766.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
rRNA methylase, putative, group 3
L1_007_000M1_scaffold_523_22
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19486..19926
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75765.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Membrane protein implicated in regulation of membrane protease activity
L1_007_000M1_scaffold_523_23
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19929..20861
DNA (933bp) protein (311aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DAC8_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:CCX75764.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Membrane protease subunits, stomatin/prohibitin homologs
L1_007_000M1_scaffold_523_24
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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20917..21909
DNA (993bp) protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Dorea sp. CAG:105 RepID=R5D6G7_9FIRM
L1_007_000M1_scaffold_523_25
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21927..22907
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Dorea sp. CAG:105 RepID=R5DFZ2_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_26
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22946..23275
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DII8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75761.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_523_27
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23285..24058
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Dorea sp. CAG:105 RepID=R5D6A5_9FIRM
L1_007_000M1_scaffold_523_28
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24061..25017
DNA (957bp) protein (319aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
tRNA-dihydrouridine synthase n=1 Tax=Dorea sp. CAG:105 RepID=R5DAC3_9FIRM
tRNA-U20-dihydrouridine synthase
L1_007_000M1_scaffold_523_29
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25223..27838
DNA (2616bp) protein (872aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.2.1.10 1.1.1.1)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D6G3_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_523_30
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28479..30611
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DFY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75757.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
Displaying items 1-30 of 44 in total

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