ggKbase home page

L1_007_000M1_scaffold_560

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_560_1
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245..529)
DNA (285bp) protein (95aa)
DNA-binding protein HU-alpha n=4 Tax=Proteobacteria RepID=D9Y602_9BURK
DNA-binding protein HU-alpha {ECO:0000313|EMBL:CCX85533.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
histone family protein DNA-binding protein
L1_007_000M1_scaffold_560_2
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1019..2182)
DNA (1164bp) protein (388aa)
fhp; nitric oxide dioxygenase (EC:1.14.12.17)
Putative nitric oxide dioxygenase n=2 Tax=Burkholderiales RepID=D9Y601_9BURK
Putative nitric oxide dioxygenase {ECO:0000313|EMBL:EFL82846.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L1_007_000M1_scaffold_560_3
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2869..3786
DNA (918bp) protein (306aa)
L-2-hydroxyisocaproate dehydrogenase n=2 Tax=Burkholderiales RepID=D9Y600_9BURK
L-2-hydroxyisocaproate dehydrogenase {ECO:0000313|EMBL:EGG50412.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
L-lactate dehydrogenase
L1_007_000M1_scaffold_560_4
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3841..4248)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=F3QNV1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL82844.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L1_007_000M1_scaffold_560_5
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4349..5131)
DNA (783bp) protein (261aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y5Z8_9BURK
Putative potassium channel subunit {ECO:0000313|EMBL:CCX85497.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
potassium channel subunit
L1_007_000M1_scaffold_560_6
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5249..5824)
DNA (576bp) protein (192aa)
Hydrolase, NUDIX family n=2 Tax=Parasutterella RepID=F3QNV3_9BURK
Hydrolase NUDIX family {ECO:0000313|EMBL:CCX85492.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
ADP-ribose pyrophosphatase
L1_007_000M1_scaffold_560_7
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6044..6259
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y5Z6_9BURK
Conserved domain protein {ECO:0000313|EMBL:CCX85487.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L1_007_000M1_scaffold_560_8
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6441..7373
DNA (933bp) protein (311aa)
Transcriptional regulator, AraC family n=2 Tax=Burkholderiales RepID=D9Y5Z5_9BURK
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFL82840.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_560_9
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7473..8636
DNA (1164bp) protein (388aa)
Putative selenium metabolism hydrolase n=2 Tax=Burkholderiales RepID=D9Y5Z4_9BURK
Putative selenium metabolism hydrolase {ECO:0000313|EMBL:EGG50418.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
peptidase
L1_007_000M1_scaffold_560_10
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8638..9831
DNA (1194bp) protein (398aa)
Putative diaminopropionate ammonia-lyase n=2 Tax=Burkholderiales RepID=D9Y5Z3_9BURK
Putative diaminopropionate ammonia-lyase {ECO:0000313|EMBL:EFL82838.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
diaminopropionate ammonia-lyase
L1_007_000M1_scaffold_560_11
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9952..10863
DNA (912bp) protein (304aa)
Putative membrane protein n=2 Tax=Burkholderiales RepID=D9Y5Z2_9BURK
Putative membrane protein {ECO:0000313|EMBL:EFL82837.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
yicL_2; putative inner membrane transporter YicL
L1_007_000M1_scaffold_560_12
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10908..12521)
DNA (1614bp) protein (538aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=2 Tax=Burkholderiales RepID=D9Y5Z1_9BURK
L1_007_000M1_scaffold_560_13
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12812..13240
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y5Z0_9BURK
Conserved domain protein {ECO:0000313|EMBL:CCX85476.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
phenylacetic acid degradation-like protein
L1_007_000M1_scaffold_560_14
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13290..14585)
DNA (1296bp) protein (432aa)
TRAP transporter, DctM subunit n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QNW1_9BURK
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EGG50423.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
TRAP dicarboxylate transporter subunit DctM
L1_007_000M1_scaffold_560_15
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14595..15065)
DNA (471bp) protein (157aa)
TRAP transporter, DctQ-like membrane protein n=2 Tax=Parasutterella RepID=F3QNW2_9BURK
TRAP transporter DctQ-like membrane protein {ECO:0000313|EMBL:CCX85473.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
tripartite AtP-independent periplasmic transporter subunit DctQ
L1_007_000M1_scaffold_560_16
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15146..16225)
DNA (1080bp) protein (360aa)
TRAP transporter solute receptor, DctP family n=2 Tax=Parasutterella RepID=F3QNW3_9BURK
TRAP transporter solute receptor DctP family {ECO:0000313|EMBL:CCX85468.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
TRAP dicarboxylate transporter subunit DctP
L1_007_000M1_scaffold_560_17
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16555..17118
DNA (564bp) protein (188aa)
Phosphoribosyl transferase domain protein n=3 Tax=Burkholderiales RepID=D9Y5Y6_9BURK
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:CCX85466.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
phosphoribosyltransferase
L1_007_000M1_scaffold_560_18
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17137..17823
DNA (687bp) protein (229aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
MTA/SAH nucleosidase n=2 Tax=Burkholderiales RepID=D9Y5Y5_9BURK
5-methylthioadenosine/S-adenosylhomocysteine nucleosidase
L1_007_000M1_scaffold_560_19
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18435..18569)
DNA (135bp) protein (45aa)
Conserved domain protein n=2 Tax=Parasutterella RepID=F3QNW7_9BURK
Conserved domain protein {ECO:0000313|EMBL:CCX85449.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L1_007_000M1_scaffold_560_20
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19085..20470
DNA (1386bp) protein (462aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
tig; trigger factor (EC:5.2.1.8)
Trigger factor n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QNW8_9BURK
L1_007_000M1_scaffold_560_21
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20588..21217
DNA (630bp) protein (210aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QNW9_9BURK
ATP-dependent Clp protease, proteolytic subunit ClpP
L1_007_000M1_scaffold_560_22
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21250..22575
DNA (1326bp) protein (442aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QNX0_9BURK
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX
L1_007_000M1_scaffold_560_23
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22814..25234
DNA (2421bp) protein (807aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
ATP-dependent protease La Type I (EC:3.4.21.53)
Lon protease n=2 Tax=Burkholderiales RepID=D9Y5Y0_9BURK
L1_007_000M1_scaffold_560_24
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25583..25855
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=3 Tax=Burkholderiales RepID=F3QNX2_9BURK
DNA-binding protein HU-beta {ECO:0000313|EMBL:CCX87411.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
histone family protein DNA-binding protein
L1_007_000M1_scaffold_560_25
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25927..26247)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PQF3_9ZZZZ
hypothetical protein
Tax=RBG_16_Gallionellales_56_9_curated
L1_007_000M1_scaffold_560_26
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26500..27891
DNA (1392bp) protein (464aa)
Reverse transcriptase n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QNX3_9BURK
Reverse transcriptase {ECO:0000313|EMBL:EGG50435.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
hypothetical protein
L1_007_000M1_scaffold_560_27
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28036..29217)
DNA (1182bp) protein (394aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QLP4_9BURK
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EGG53001.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
MFS transporter
L1_007_000M1_scaffold_560_28
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29220..29930)
DNA (711bp) protein (237aa)
B3/4 domain protein n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QLP3_9BURK
B3/4 domain protein {ECO:0000313|EMBL:EGG53000.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
hypothetical protein
L1_007_000M1_scaffold_560_29
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29923..30768)
DNA (846bp) protein (282aa)
Transcriptional regulator, MerR family n=2 Tax=Burkholderiales RepID=D9Y5A3_9BURK
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EFL83118.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
transcriptional regulator of multidrug-efflux transporter
L1_007_000M1_scaffold_560_30
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31171..31860
DNA (690bp) protein (230aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y5A4_9BURK
Conserved domain protein {ECO:0000313|EMBL:CCX87929.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
Displaying items 1-30 of 69 in total

View Taxonomy