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L1_007_000M1_scaffold_580

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_580_1
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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209..1786
-----------------
DNA (1578bp)
protein (526aa)
O-antigen biosynthesis protein WbqP n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZYL0_9FIRM
O-antigen biosynthesis protein WbqP {ECO:0000313|EMBL:EMZ22127.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
sugar transferase
L1_007_000M1_scaffold_580_2
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1898..3214
-----------------
DNA (1317bp)
protein (439aa)
Predicted ATP-binding protein involved in virulence n=1 Tax=Clostridium sp. CAG:122 RepID=R5RQ42_9CLOT
Predicted ATP-binding protein involved in virulence {ECO:0000313|EMBL:CCZ42773.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Predicted ATP-binding protein involved in virulence
L1_007_000M1_scaffold_580_3
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3222..3860
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003492477
Uncharacterized protein {ECO:0000313|EMBL:EPF21577.1}; TaxID=482300 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa SPC777.;"
hypothetical protein
L1_007_000M1_scaffold_580_4
unknown

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3866..4237
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

L1_007_000M1_scaffold_580_5
unknown

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4334..4657
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

L1_007_000M1_scaffold_580_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4654..5115
-----------------
DNA (462bp)
protein (154aa)
Putative toxin-antitoxin system, antitoxin component n=1 Tax=Clostridium sp. D5 RepID=F0YV04_9CLOT
Putative toxin-antitoxin system, antitoxin component {ECO:0000313|EMBL:EGB94724.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000M1_scaffold_580_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5230..8580
-----------------
DNA (3351bp)
protein (1117aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHK6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93103.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_007_000M1_scaffold_580_8
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8653..9789
-----------------
DNA (1137bp)
protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LRN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB90053.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
hypothetical protein
L1_007_000M1_scaffold_580_9
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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9761..10696
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9K5P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41678.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
AAA ATPase
L1_007_000M1_scaffold_580_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10693..11484
-----------------
DNA (792bp)
protein (264aa)
HNH endonuclease n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LY60_CLOB8
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ABR35290.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L1_007_000M1_scaffold_580_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11671..12942
-----------------
DNA (1272bp)
protein (424aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum CFSAN002369 RepID=S8CDV5_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL83634.1}; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A).;"
L1_007_000M1_scaffold_580_12
unknown

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12905..13714
-----------------
DNA (810bp)
protein (270aa)

This feature has no annotations

L1_007_000M1_scaffold_580_13
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13840..14967
-----------------
DNA (1128bp)
protein (376aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B9M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ37101.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Glycosyltransferase
L1_007_000M1_scaffold_580_14
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14981..16243
-----------------
DNA (1263bp)
protein (421aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BGE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ37583.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L1_007_000M1_scaffold_580_15
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16245..17021
-----------------
DNA (777bp)
protein (259aa)
O-antigen ABC exporter permease protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5KAP0_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
lipopolysaccharide transport system permease
L1_007_000M1_scaffold_580_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17032..18459
-----------------
DNA (1428bp)
protein (476aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LWA0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ93759.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
lipopolysaccharide transport system ATP-binding protein
L1_007_000M1_scaffold_580_17
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18476..19618
-----------------
DNA (1143bp)
protein (381aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00036B748A
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:CDE30889.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
SAM-dependent methyltransferase
L1_007_000M1_scaffold_580_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19621..21054
-----------------
DNA (1434bp)
protein (478aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H765_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35215.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Glycosyltransferase
L1_007_000M1_scaffold_580_19
unknown

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21179..23239
-----------------
DNA (2061bp)
protein (687aa)

This feature has no annotations

L1_007_000M1_scaffold_580_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23431..24462
-----------------
DNA (1032bp)
protein (344aa)
class II aldolase/adducin family protein (EC:1.1.1.184)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ50532.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L1_007_000M1_scaffold_580_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24475..25248
-----------------
DNA (774bp)
protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TTC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ50531.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L1_007_000M1_scaffold_580_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25251..26066
-----------------
DNA (816bp)
protein (272aa)
dTDP-glucose pyrophosphorylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6THB0_9CLOT
dTDP-glucose pyrophosphorylase {ECO:0000313|EMBL:EKQ50530.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L1_007_000M1_scaffold_580_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26071..28164
-----------------
DNA (2094bp)
protein (698aa)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
prk; phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U685_9CLOT
L1_007_000M1_scaffold_580_24
Leptotrichia goodfellowii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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28165..28839
-----------------
DNA (675bp)
protein (225aa)
HAD hydrolase, family IA, variant 1 n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GK65_9FUSO
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EEY35511.1}; TaxID=596323 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia goodfellowii F0264.;"
HAD superfamily hydrolase
L1_007_000M1_scaffold_580_25
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28817..29212
-----------------
DNA (396bp)
protein (132aa)
Putative membrane protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUN0_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EKQ50527.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
polysaccharide synthesis protein GtrA
L1_007_000M1_scaffold_580_26
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29216..29923
-----------------
DNA (708bp)
protein (236aa)
Glycosyl transferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TTC4_9CLOT
Glycosyl transferase {ECO:0000313|EMBL:EKQ50526.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
family 2 glycosyl transferase
L1_007_000M1_scaffold_580_27
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29944..30546
-----------------
DNA (603bp)
protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6THA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ50525.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L1_007_000M1_scaffold_580_28
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31037..31300
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5KE35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY59212.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
NAD-dependent epimerase/dehydratase
L1_007_000M1_scaffold_580_29
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31332..32396
-----------------
DNA (1065bp)
protein (355aa)
manC; mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Putative mannose-1-phosphate guanylyltransferase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PRI4_9FIRM
Putative mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:CDC21106.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
L1_007_000M1_scaffold_580_30
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32801..33616)
-----------------
DNA (816bp)
protein (272aa)
Putative uncharacterized protein n=8 Tax=unclassified Lachnospiraceae RepID=E5XKE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80227.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
Displaying items 1-30 of 40 in total

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