ggKbase home page

L1_007_000M1_scaffold_606

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_606_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

107..499
DNA (393bp) protein (131aa)
Lactoylglutathione lyase and related lyases n=2 Tax=environmental samples RepID=R5UK10_9FIRM
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CDA25720.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Lactoylglutathione lyase and related lyases
L1_007_000M1_scaffold_606_2
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

517..1881
DNA (1365bp) protein (455aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Roseburia sp. CAG:197 RepID=R5YM40_9FIRM
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CDA25719.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L1_007_000M1_scaffold_606_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1865..2839
DNA (975bp) protein (325aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Sugar kinases ribokinase family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5B0_9FIRM
Sugar kinases ribokinase family {ECO:0000313|EMBL:CCZ78626.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_606_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3110..4996)
DNA (1887bp) protein (629aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKT3_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ78625.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000M1_scaffold_606_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4989..6722)
DNA (1734bp) protein (578aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Roseburia sp. CAG:18 RepID=R5USB4_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CCZ78624.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000M1_scaffold_606_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6715..7200)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78623.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators
L1_007_000M1_scaffold_606_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7720..8226
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25871.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L1_007_000M1_scaffold_606_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8242..8928
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78621.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
chemotaxis protein CheY
L1_007_000M1_scaffold_606_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9030..9977
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78620.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter related protein
L1_007_000M1_scaffold_606_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9946..10641
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5USB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78619.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_606_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10657..11394
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UK02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78618.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_606_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11406..12305
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78617.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_606_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12332..12835)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78616.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
conserved hypothetical protein (putative transposase or invertase)
L1_007_000M1_scaffold_606_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12832..13251)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78616.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_606_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13485..13952
DNA (468bp) protein (156aa)
Small heat shock protein C2 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5A0_9FIRM
Small heat shock protein C2 {ECO:0000313|EMBL:CCZ78611.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_606_16
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14005..14562)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0INU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT21697.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hxlR-like helix-turn-helix family protein
L1_007_000M1_scaffold_606_17
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14974..15177
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37436.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
SIR2; NAD-dependent protein deacetylase, SIR2 family
L1_007_000M1_scaffold_606_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15247..15546
DNA (300bp) protein (100aa)
Transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN12_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ79673.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator
L1_007_000M1_scaffold_606_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15524..16657
DNA (1134bp) protein (378aa)
HipA N-terminal domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5VG01_9FIRM
HipA N-terminal domain {ECO:0000313|EMBL:CCZ79672.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
HipA N-terminal domain
L1_007_000M1_scaffold_606_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16679..17314)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79671.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_606_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17637..20228
DNA (2592bp) protein (864aa)
ATP-dependent chaperone ClpB n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNN8_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
heat shock protein ClpB-like protein
L1_007_000M1_scaffold_606_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20503..21831
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79669.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L1_007_000M1_scaffold_606_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21850..23136
DNA (1287bp) protein (429aa)
Aspartate aminotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN02_9FIRM
Aspartate aminotransferase {ECO:0000313|EMBL:CCZ79668.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
aspartate aminotransferase
L1_007_000M1_scaffold_606_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23358..23543
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79667.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_606_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23553..24632
DNA (1080bp) protein (360aa)
Component of type IV pilus n=1 Tax=Roseburia sp. CAG:18 RepID=R5V898_9FIRM
Component of type IV pilus {ECO:0000313|EMBL:CCZ79666.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Flp pilus assembly protein, ATPase CpaF
L1_007_000M1_scaffold_606_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24629..26014
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79665.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_606_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26033..26410
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79664.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_606_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26425..26532
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79663.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_606_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26536..26682
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79662.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_606_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26682..26855
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V894_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79661.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Displaying items 1-30 of 43 in total

View Taxonomy