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L1_007_000M1_scaffold_626

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_626_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..977
-----------------
DNA (975bp)
protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JZ38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63041.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
metallophosphoesterase
L1_007_000M1_scaffold_626_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

982..2871
-----------------
DNA (1890bp)
protein (630aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43572.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000M1_scaffold_626_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2977..4137)
-----------------
DNA (1161bp)
protein (387aa)
Probable hydroxymethylpyrimidine transporter CytX n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN54_9CLOT
Probable hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CCY43573.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
probable hydroxymethylpyrimidine transporter CytX
L1_007_000M1_scaffold_626_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4140..4946)
-----------------
DNA (807bp)
protein (269aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITC4_9CLOT
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CCY43574.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_000M1_scaffold_626_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5053..5208
-----------------
DNA (156bp)
protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IND3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43575.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_000M1_scaffold_626_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5361..6158)
-----------------
DNA (798bp)
protein (266aa)
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.268)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITD0_9CLOT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CCY43584.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_000M1_scaffold_626_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6258..7679)
-----------------
DNA (1422bp)
protein (474aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3I6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43586.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid permease
L1_007_000M1_scaffold_626_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7745..9151)
-----------------
DNA (1407bp)
protein (469aa)
Amino acid permease n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN64_9CLOT
Amino acid permease {ECO:0000313|EMBL:CCY43588.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid permease
L1_007_000M1_scaffold_626_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9506..10969)
-----------------
DNA (1464bp)
protein (488aa)
Ethanolamine utilization sensory transduction histidine kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5INE3_9CLOT
Ethanolamine utilization sensory transduction histidine kinase {ECO:0000313|EMBL:CCY43590.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sensor histidine kinase
L1_007_000M1_scaffold_626_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10992..11564)
-----------------
DNA (573bp)
protein (191aa)
Response regulator receiver and ANTAR domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3V6_9CLOT
Response regulator receiver and ANTAR domain protein {ECO:0000313|EMBL:CCY43592.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
response regulator receiver and ANTAR domain-containing protein
L1_007_000M1_scaffold_626_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11618..12724)
-----------------
DNA (1107bp)
protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43593.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000M1_scaffold_626_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12996..13346)
-----------------
DNA (351bp)
protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43595.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATPase
L1_007_000M1_scaffold_626_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13722..13988
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43598.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000M1_scaffold_626_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14162..16147)
-----------------
DNA (1986bp)
protein (662aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transketolase n=1 Tax=Clostridium sp. CAG:7 RepID=R5INF1_9CLOT
transketolase
L1_007_000M1_scaffold_626_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16318..17430)
-----------------
DNA (1113bp)
protein (371aa)
Creatininase {ECO:0000313|EMBL:EEG51608.1}; EC=3.5.2.10 {ECO:0000313|EMBL:EEG51608.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Creatininase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAP9_9CLOT
creatinine amidohydrolase
L1_007_000M1_scaffold_626_16
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17488..18483)
-----------------
DNA (996bp)
protein (332aa)
Ribose transport system permease protein RbsC n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W5_CLOBO
Sugar ABC transporter permease {ECO:0000313|EMBL:KGM97686.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
ribose ABC transporter permease
L1_007_000M1_scaffold_626_17
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18455..19978)
-----------------
DNA (1524bp)
protein (508aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
monosaccharide-transporting ATPase (EC:3.6.3.17)
Ribose import ATP-binding protein RbsA n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W6_CLOBO
L1_007_000M1_scaffold_626_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19996..21021)
-----------------
DNA (1026bp)
protein (342aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Desulfurispora thermophila RepID=UPI000366DF5F
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH95322.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT12695.;"
periplasmic binding protein/LacI transcriptional regulator
L1_007_000M1_scaffold_626_19
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21262..22386
-----------------
DNA (1125bp)
protein (375aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPY0_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDO62485.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
transcriptional regulator
L1_007_000M1_scaffold_626_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22457..23806)
-----------------
DNA (1350bp)
protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3W4_9CLOT
L1_007_000M1_scaffold_626_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23974..24750)
-----------------
DNA (777bp)
protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43603.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000M1_scaffold_626_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24984..25676)
-----------------
DNA (693bp)
protein (231aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
methylthioadenosine nucleosidase (EC:3.2.2.9 3.2.2.16)
MTA/SAH nucleosidase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITE1_9CLOT
L1_007_000M1_scaffold_626_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25898..26143
-----------------
DNA (246bp)
protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43605.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000M1_scaffold_626_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26226..26840)
-----------------
DNA (615bp)
protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3K4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43606.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000M1_scaffold_626_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27510..28568
-----------------
DNA (1059bp)
protein (353aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN78_9CLOT
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CCY43608.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC-type sugar transport system, periplasmic component
L1_007_000M1_scaffold_626_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28661..30205
-----------------
DNA (1545bp)
protein (515aa)
rbsA; ribose ABC transporter ATP-binding protein (EC:3.6.3.17)
ABC-type sugar transport system ATPase component n=1 Tax=Clostridium sp. CAG:7 RepID=R5ING0_9CLOT
ABC-type sugar transport system ATPase component {ECO:0000313|EMBL:CCY43610.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_000M1_scaffold_626_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30186..31121
-----------------
DNA (936bp)
protein (312aa)
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3K8_9CLOT
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components {ECO:0000313|EMBL:CCY43611.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
L1_007_000M1_scaffold_626_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31138..32622
-----------------
DNA (1485bp)
protein (495aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Sugar (Pentulose and hexulose) kinases n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN81_9CLOT
Sugar (Pentulose and hexulose) kinases {ECO:0000313|EMBL:CCY43613.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_000M1_scaffold_626_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32689..33498)
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43614.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000M1_scaffold_626_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33510..34058)
-----------------
DNA (549bp)
protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ING5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43615.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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