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L1_007_000M1_scaffold_652

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Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_652_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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183..749
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25321.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_652_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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794..2749
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QWF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25322.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
yybT; putative phosphodiesterase
L1_007_000M1_scaffold_652_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2755..3201
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9R0_9FIRM
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ribosomal protein L9
L1_007_000M1_scaffold_652_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3213..4586
DNA (1374bp) protein (458aa)
Replicative DNA helicase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QG89_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:CCZ25324.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
dnaC; replicative DNA helicase
L1_007_000M1_scaffold_652_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4598..5212
DNA (615bp) protein (205aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C579_9FIRM
L1_007_000M1_scaffold_652_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5385..5693
DNA (309bp) protein (103aa)
Transcriptional regulator, PadR family n=5 Tax=Erysipelotrichaceae RepID=B0N3V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47938.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_007_000M1_scaffold_652_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5698..6852
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QG12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25259.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_652_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6870..8045
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QG12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25259.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_652_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8051..8554
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q961_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25260.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_652_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8638..9426
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24140.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_652_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9512..10588
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCT8_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
prfA; Peptide chain release factor 1
L1_007_000M1_scaffold_652_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10588..11445
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Release factor glutamine methyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6H8_9FIRM
modification methylase, hemk family
L1_007_000M1_scaffold_652_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11447..11944
DNA (498bp) protein (166aa)
Ribosomal-protein-serine acetyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT21_9FIRM
Ribosomal-protein-serine acetyltransferase {ECO:0000313|EMBL:CCZ24137.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
acetyltransferase family protein
L1_007_000M1_scaffold_652_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12077..14257
DNA (2181bp) protein (727aa)
Stage II sporulation protein E n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPJ6_9FIRM
Stage II sporulation protein E {ECO:0000313|EMBL:CCZ24136.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
spoIIE; stage II sporulation protein e
L1_007_000M1_scaffold_652_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14287..15531
DNA (1245bp) protein (415aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5V8_9FIRM
L1_007_000M1_scaffold_652_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15542..16075
DNA (534bp) protein (178aa)
hpt; hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCT6_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CCZ24134.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_652_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16088..18037
DNA (1950bp) protein (650aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6H5_9FIRM
L1_007_000M1_scaffold_652_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18173..19042
DNA (870bp) protein (290aa)
33 kDa chaperonin n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT18_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_652_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19080..19565
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24131.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_007_000M1_scaffold_652_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19709..20683
DNA (975bp) protein (325aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
dusC; tRNA-dihydrouridine synthase C (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5V4_9FIRM
L1_007_000M1_scaffold_652_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20704..21312)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24129.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Transcriptional regulator
L1_007_000M1_scaffold_652_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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21466..23559
DNA (2094bp) protein (698aa)
MMPL family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6H0_9FIRM
MMPL family protein {ECO:0000313|EMBL:CCZ24128.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_652_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23561..25132
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24127.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
X-X-X-Leu-X-X-Gly heptad repeats
L1_007_000M1_scaffold_652_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25336..25707
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24126.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_652_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25864..26316
DNA (453bp) protein (151aa)
RNA polymerase ECF subfamily sigma factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5D7_9FIRM
RNA polymerase ECF subfamily sigma factor {ECO:0000313|EMBL:CCZ23753.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RNA polymerase ECF subfamily sigma factor
L1_007_000M1_scaffold_652_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26306..27823
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23754.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_007_000M1_scaffold_652_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27813..28952
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24125.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
aldo/keto reductase
L1_007_000M1_scaffold_652_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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29308..30798
DNA (1491bp) protein (497aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCS7_9FIRM
L1_007_000M1_scaffold_652_29
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(32334..32774)
DNA (441bp) protein (147aa)
Transposase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CEA5_9FIRM
Transposase {ECO:0000313|EMBL:EEC88903.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Transposase and inactivated derivatives
L1_007_000M1_scaffold_652_30
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32801..33307)
DNA (507bp) protein (169aa)
Transposase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CEA5_9FIRM
Transposase {ECO:0000313|EMBL:EEC88903.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
transposase
Displaying items 1-30 of 62 in total

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