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L1_007_000M1_scaffold_657

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_657_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1091)
DNA (1089bp) protein (363aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium sp. CAG:43 RepID=R7A435_9CLOT
L1_007_000M1_scaffold_657_2
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1317..1820)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DBF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76169.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Predicted membrane protein
L1_007_000M1_scaffold_657_3
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2215..3120
DNA (906bp) protein (302aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Quinolinate synthetase complex A subunit n=1 Tax=Dorea sp. CAG:105 RepID=R5D7H1_9FIRM
quinolinate synthetase A
L1_007_000M1_scaffold_657_4
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3157..4347
DNA (1191bp) protein (397aa)
Aspartate oxidase (EC:1.4.3.16)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DJS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76171.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_657_5
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4359..5210
DNA (852bp) protein (284aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=1 Tax=Dorea sp. CAG:105 RepID=R5DH76_9FIRM
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:CCX76172.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_657_6
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5310..6701
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Dorea sp. CAG:105 RepID=R5D7L4_9FIRM
L1_007_000M1_scaffold_657_7
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6772..7461
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DBG1_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX76174.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L1_007_000M1_scaffold_657_8
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7451..8689
DNA (1239bp) protein (413aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D7H5_9FIRM
histidine kinase
L1_007_000M1_scaffold_657_9
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8700..9695
DNA (996bp) protein (332aa)
Ser/Thr phosphatase family protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DJS5_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CCX76176.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
DNA repair exonuclease
L1_007_000M1_scaffold_657_10
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9698..11239
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DH81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76177.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_657_11
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11673..12536)
DNA (864bp) protein (288aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D7M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76178.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_657_12
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12523..13548)
DNA (1026bp) protein (342aa)
Putative DNA replication protein DnaC n=1 Tax=Dorea sp. CAG:105 RepID=R5DBG7_9FIRM
Putative DNA replication protein DnaC {ECO:0000313|EMBL:CCX76179.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
DNA replication protein DnaC
L1_007_000M1_scaffold_657_13
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13571..14572)
DNA (1002bp) protein (334aa)
DnaD domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D7I0_9FIRM
DnaD domain protein {ECO:0000313|EMBL:CCX76180.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
DnaD and phage-associated domain
L1_007_000M1_scaffold_657_14
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14711..16087)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Dorea sp. CAG:105 RepID=R5DJS8_9FIRM
L1_007_000M1_scaffold_657_15
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16318..17592
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Dorea sp. CAG:105 RepID=R5DH86_9FIRM
L1_007_000M1_scaffold_657_16
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17589..18707
DNA (1119bp) protein (373aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Dorea sp. CAG:105 RepID=R5D7M5_9FIRM
L1_007_000M1_scaffold_657_17
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18750..19025
DNA (276bp) protein (92aa)
Putative septation protein SpoVG n=1 Tax=Dorea sp. CAG:105 RepID=R5DBH2_9FIRM
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Uncharacterized protein, involved in the regulation of septum location
L1_007_000M1_scaffold_657_18
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19205..20050)
DNA (846bp) protein (282aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Dorea sp. CAG:105 RepID=R5D7I5_9FIRM
Pseudouridine synthase {ECO:0000313|EMBL:CCX76185.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_657_19
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21165..22604
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Dorea sp. CAG:105 RepID=R5DJT2_9FIRM
L1_007_000M1_scaffold_657_20
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22689..23459
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DH92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76187.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
transposase
L1_007_000M1_scaffold_657_21
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23574..24902
DNA (1329bp) protein (443aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.4.- 3.1.3.-)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D7N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76188.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_657_22
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25055..26065
DNA (1011bp) protein (337aa)
Spore coat protein CotS family n=1 Tax=Dorea sp. CAG:105 RepID=R5DBI1_9FIRM
Spore coat protein CotS family {ECO:0000313|EMBL:CCX76189.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
CotS family spore coat protein
L1_007_000M1_scaffold_657_23
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26261..26536
DNA (276bp) protein (92aa)
DNA-binding protein HU-1 n=1 Tax=Dorea sp. CAG:105 RepID=R5D7I8_9FIRM
DNA-binding protein HU-1 {ECO:0000313|EMBL:CCX76190.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Bacterial nucleoid DNA-binding protein
L1_007_000M1_scaffold_657_24
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27035..27274
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DJT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76191.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_007_000M1_scaffold_657_25
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27507..27794
DNA (288bp) protein (96aa)
Sporulation protein YabP n=1 Tax=Dorea sp. CAG:105 RepID=R5DH98_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:CCX76192.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
sporulation protein YabP
L1_007_000M1_scaffold_657_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27798..28121
DNA (324bp) protein (108aa)
Spore cortex protein YabQ (Spore_YabQ) n=2 Tax=Clostridiales RepID=B0NEV1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38951.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Spore cortex protein YabQ (Spore_YabQ).
L1_007_000M1_scaffold_657_27
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28214..28540
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D7N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX76193.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Septum formation initiator.
L1_007_000M1_scaffold_657_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28720..30123
DNA (1404bp) protein (468aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Putative stage II sporulation protein E n=2 Tax=Clostridiales RepID=B0NEV3_CLOSV
Putative stage II sporulation protein E {ECO:0000313|EMBL:EDS06890.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L1_007_000M1_scaffold_657_29
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30274..31638
DNA (1365bp) protein (455aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Dorea sp. CAG:105 RepID=R5D5C4_9FIRM
cell cycle protein MesJ
L1_007_000M1_scaffold_657_30
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31622..32149
DNA (528bp) protein (176aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Dorea sp. CAG:317 RepID=R6WMJ1_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDD08104.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Displaying items 1-30 of 47 in total

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