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L1_007_000M1_scaffold_676

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Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_676_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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115..1851
DNA (1737bp) protein (579aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 PF2_9FIRM">RepID=U2LPF2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ89008.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000M1_scaffold_676_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1865..3628
DNA (1764bp) protein (588aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHS1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ89009.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_676_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3735..4619)
DNA (885bp) protein (295aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KA85_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ERJ89010.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Esterase/lipase
L1_007_000M1_scaffold_676_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4616..5545)
DNA (930bp) protein (310aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JRX0_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ERJ89011.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Lysophospholipase
L1_007_000M1_scaffold_676_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5741..7243)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K9T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89012.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Enterochelin esterase and related enzymes
L1_007_000M1_scaffold_676_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7483..8538
DNA (1056bp) protein (352aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 PF5_9FIRM">RepID=U2LPF5_9FIRM
L1_007_000M1_scaffold_676_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8664..10613
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K9P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ88982.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_676_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10737..12539
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Elongation factor 4 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LPC4_9FIRM
GTP-binding protein LepA
L1_007_000M1_scaffold_676_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13358..15874)
DNA (2517bp) protein (839aa)
Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KTX7_9FIRM
Cyclic diguanylate phosphodiesterase domain protein {ECO:0000313|EMBL:ERJ95747.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
diguanylate cyclase/phosphodiesterase
L1_007_000M1_scaffold_676_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15900..17822)
DNA (1923bp) protein (641aa)
Diguanylate cyclase domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KUI8_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERJ95745.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
diguanylate cyclase with N-terminal HTH-type transcriptional regulator domain
L1_007_000M1_scaffold_676_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18204..19154
DNA (951bp) protein (317aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Quinolinate synthetase complex, A subunit n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M1X3_9FIRM
quinolinate synthetase A
L1_007_000M1_scaffold_676_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19157..19825
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase (EC:3.1.3.5)
HAD hydrolase, family IA, variant 1 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M8U5_9FIRM
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:ERJ95743.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_676_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20105..22144
DNA (2040bp) protein (680aa)
HD domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KTX2_9FIRM
HD domain protein {ECO:0000313|EMBL:ERJ95742.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
diguanylate cyclase with N-terminal HTH-type transcriptional regulator domain
L1_007_000M1_scaffold_676_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22141..22857
DNA (717bp) protein (239aa)
ThiF family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KB48_9FIRM
ThiF family protein {ECO:0000313|EMBL:ERJ95741.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_676_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22966..23724
DNA (759bp) protein (253aa)
ThiF family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M1W8_9FIRM
ThiF family protein {ECO:0000313|EMBL:ERJ95739.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
L1_007_000M1_scaffold_676_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23721..23951
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M8U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95738.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_676_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24024..25181)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KU02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95777.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_676_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25339..25617)
DNA (279bp) protein (93aa)
Putative acyl carrier protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KB80_9FIRM
Putative acyl carrier protein {ECO:0000313|EMBL:ERJ95776.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Acyl carrier protein
L1_007_000M1_scaffold_676_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25614..27413)
DNA (1800bp) protein (600aa)
FkbH domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KUL6_9FIRM
FkbH domain protein {ECO:0000313|EMBL:ERJ95775.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain
L1_007_000M1_scaffold_676_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27426..29084)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M203_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95774.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_676_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29104..30510)
DNA (1407bp) protein (469aa)
MBOAT family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M8X6_9FIRM
MBOAT family protein {ECO:0000313|EMBL:ERJ95773.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted membrane protein involved in D-alanine export
L1_007_000M1_scaffold_676_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30817..31848)
DNA (1032bp) protein (344aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KB76_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:ERJ95771.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_676_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31861..32325)
DNA (465bp) protein (155aa)
Nodulation efficiency protein D n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KUL2_9FIRM
Nodulation efficiency protein D {ECO:0000313|EMBL:ERJ95770.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Membrane protein implicated in regulation of membrane protease activity
L1_007_000M1_scaffold_676_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32371..32541)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M1Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95769.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L1_007_000M1_scaffold_676_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32611..33423)
DNA (813bp) protein (271aa)
Cof-like hydrolase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KB70_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:ERJ95766.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
cof family hydrolase
L1_007_000M1_scaffold_676_26
unknown

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33515..33691
DNA (177bp) protein (59aa)

This feature has no annotations

L1_007_000M1_scaffold_676_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33625..34257)
DNA (633bp) protein (211aa)
CotJC protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KUK7_9FIRM
CotJC protein {ECO:0000313|EMBL:ERJ95765.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
manganese containing catalase
L1_007_000M1_scaffold_676_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34259..34513)
DNA (255bp) protein (85aa)
Putative cotJB protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M1Z3_9FIRM
Putative cotJB protein {ECO:0000313|EMBL:ERJ95764.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_007_000M1_scaffold_676_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34506..34778)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M8W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ95763.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_676_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35068..35496
DNA (429bp) protein (143aa)
Putative HTH-type transcriptional regulator IscR n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KJF6_9FIRM
Putative HTH-type transcriptional regulator IscR {ECO:0000313|EMBL:ERJ92427.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
transcriptional regulator, BadM/Rrf2 family
Displaying items 1-30 of 104 in total

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