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L1_007_000M1_scaffold_696

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_696_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(177..359)
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AI10_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13620.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_696_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(322..597)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBA4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13621.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_696_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(668..1492)
DNA (825bp) protein (275aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6ANQ4_9PORP
L1_007_000M1_scaffold_696_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1564..2823)
DNA (1260bp) protein (420aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=3 Tax=Parabacteroides merdae RepID=A7AI07_9PORP
chlorohydrolase
L1_007_000M1_scaffold_696_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2820..4130)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A0X5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN17346.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ATP-independent RNA helicase
L1_007_000M1_scaffold_696_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4132..5490)
DNA (1359bp) protein (453aa)
Peptidase dimerization domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WV10_9PORP
Peptidase dimerization domain protein {ECO:0000313|EMBL:CDD13140.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
succinyl-diaminopimelate desuccinylase
L1_007_000M1_scaffold_696_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5519..5863)
DNA (345bp) protein (115aa)
Addiction module antidote protein HigA n=4 Tax=Parabacteroides RepID=B7BC18_9PORP
HigA family addiction module antidote protein {ECO:0000313|EMBL:EKN12451.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
XRE family transcriptional regulator
L1_007_000M1_scaffold_696_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5872..6189)
DNA (318bp) protein (106aa)
Plasmid maintenance system killer protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y425_9PORP
Plasmid maintenance system killer protein {ECO:0000313|EMBL:CDD13142.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
plasmid maintenance system killer
L1_007_000M1_scaffold_696_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6281..6847)
DNA (567bp) protein (189aa)
ATP:cob(I)alamin adenosyltransferase n=3 Tax=Parabacteroides RepID=A7AI02_9PORP
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EDN85969.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATP:cob(I)alamin adenosyltransferase
L1_007_000M1_scaffold_696_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6874..8211)
DNA (1338bp) protein (446aa)
Cobyrinic acid A,C-diamide synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X1X9_9PORP
Cobyrinic acid A,C-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cobyrinic acid a,c-diamide synthase
L1_007_000M1_scaffold_696_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8214..9041)
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Parabacteroides RepID=K6A1C2_9PORP
L1_007_000M1_scaffold_696_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9088..10971)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZNM7_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:CDD13146.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-dependent outer membrane receptor protein
L1_007_000M1_scaffold_696_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11060..11461)
DNA (402bp) protein (134aa)
Putative nickel-responsive regulator n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y430_9PORP
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator nickel responsive regulator
L1_007_000M1_scaffold_696_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11999..12115
DNA (117bp) protein (39aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AHZ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13148.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_696_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12282..13109
DNA (828bp) protein (276aa)
Putative membrane protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X1Y2_9PORP
Putative membrane protein {ECO:0000313|EMBL:CDD13149.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
integral membrane protein
L1_007_000M1_scaffold_696_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13106..13318)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WV17_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13150.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_696_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13368..13541
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AHZ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13151.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_696_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


13649..14668
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Parabacteroides RepID=K6ANP2_9PORP
L1_007_000M1_scaffold_696_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14748..15134
DNA (387bp) protein (129aa)
Putative fluoride ion transporter CrcB n=4 Tax=Parabacteroides RepID=A7AHZ2_9PORP
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_696_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15138..15782
DNA (645bp) protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Endonuclease III n=4 Tax=Parabacteroides RepID=A7AHZ1_9PORP
endonuclease III
L1_007_000M1_scaffold_696_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15789..16688
DNA (900bp) protein (300aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AHZ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13155.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_696_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16709..17173)
DNA (465bp) protein (155aa)
Competence/damage-inducible domain protein CinA n=4 Tax=Parabacteroides RepID=A7AHY9_9PORP
Competence/damage-inducible domain protein CinA {ECO:0000313|EMBL:CDD13156.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
competence-damage inducible protein
L1_007_000M1_scaffold_696_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(17306..18334)
DNA (1029bp) protein (343aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Parabacteroides RepID=K6BYU7_9PORP
DNA-binding/iron metalloprotein/AP endonuclease
L1_007_000M1_scaffold_696_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18353..22948
DNA (4596bp) protein (1532aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AHY7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85954.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_696_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23073..24749)
DNA (1677bp) protein (559aa)
TrkA C-terminal domain protein n=4 Tax=Parabacteroides RepID=A7AHY6_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:EDN85953.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_696_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24861..25709
DNA (849bp) protein (283aa)
Peptidyl-prolyl cis-trans isomerase cyclophilin-type n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WV26_9PORP
Peptidyl-prolyl cis-trans isomerase cyclophilin-type {ECO:0000313|EMBL:CDD13160.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
L1_007_000M1_scaffold_696_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25734..26123
DNA (390bp) protein (130aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AHY4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85951.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_696_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26193..26633
DNA (441bp) protein (147aa)
Transcriptional regulator MarR family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y444_9PORP
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDD13162.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
MarR family transcriptional regulator
L1_007_000M1_scaffold_696_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26711..27724)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPG3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13163.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_696_30
unknown

Not on your lists

27916..28104
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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