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L1_007_000M1_scaffold_702

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_702_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2..130)
DNA (129bp) protein (43aa)
Transporter auxin efflux carrier family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9S1_9FIRM
Transporter auxin efflux carrier family protein {ECO:0000313|EMBL:CDB46968.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
auxin efflux carrier
L1_007_000M1_scaffold_702_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

326..1420
DNA (1095bp) protein (365aa)
Peptidase M48 Ste24p n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKL6_9FIRM
Peptidase M48 Ste24p {ECO:0000313|EMBL:CDB46969.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
peptidase M48 Ste24p
L1_007_000M1_scaffold_702_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(1518..1871)
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICL4_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L20
L1_007_000M1_scaffold_702_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1894..2091)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INK7_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
rpmI; 50S ribosomal protein L35
L1_007_000M1_scaffold_702_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2105..2608)
DNA (504bp) protein (168aa)
Translation initiation factor IF-3 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9K4_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
translation initiation factor IF-3
L1_007_000M1_scaffold_702_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2791..3279)
DNA (489bp) protein (163aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Ferroxidase (EC:1.16.3.1)
Ferritin Dps family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9S6_9FIRM
L1_007_000M1_scaffold_702_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3409..5319)
DNA (1911bp) protein (637aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKM2_9FIRM
L1_007_000M1_scaffold_702_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5723..7270
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46975.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_000M1_scaffold_702_9
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7297..7881
DNA (585bp) protein (195aa)
Acyl carrier protein phosphodiesterase (EC:1.7.-.-)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JIJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34074.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L1_007_000M1_scaffold_702_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7983..9911)
DNA (1929bp) protein (643aa)
TonB-dependent receptor n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9T2_9FIRM
TonB-dependent receptor {ECO:0000313|EMBL:CDB46978.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
TonB-dependent receptor
L1_007_000M1_scaffold_702_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9942..12785)
DNA (2844bp) protein (948aa)
Putative phage head-tail adaptor n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKM9_9FIRM
Putative phage head-tail adaptor {ECO:0000313|EMBL:CDB46979.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
histidine kinase
L1_007_000M1_scaffold_702_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12932..14593)
DNA (1662bp) protein (554aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICM5_9FIRM
PAS domain S-box
L1_007_000M1_scaffold_702_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14583..15263)
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INL8_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB46981.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000M1_scaffold_702_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15235..15915)
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9L5_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
phoU; phosphate uptake regulator PhoU
L1_007_000M1_scaffold_702_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15915..16667)
DNA (753bp) protein (251aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter ATP-binding protein PhoT family (TC 3.A.1.7.1) n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9T7_9FIRM
L1_007_000M1_scaffold_702_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16669..17535)
DNA (867bp) protein (289aa)
Phosphate ABC transporter permease protein PstA n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKN5_9FIRM
Phosphate ABC transporter permease protein PstA {ECO:0000313|EMBL:CDB46984.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L1_007_000M1_scaffold_702_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17532..18386)
DNA (855bp) protein (285aa)
Phosphate ABC transporter n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICN0_9FIRM
Phosphate ABC transporter {ECO:0000313|EMBL:CDB46985.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
phosphate ABC transporter inner membrane subunit PstC
L1_007_000M1_scaffold_702_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18459..19346)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46986.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
phosphate ABC transporter substrate-binding protein
L1_007_000M1_scaffold_702_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19535..20071)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46987.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_702_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20122..20814)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46988.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_702_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21155..22015)
DNA (861bp) protein (287aa)
speE1; Spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKP1_9FIRM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L1_007_000M1_scaffold_702_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22028..22843)
DNA (816bp) protein (272aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
speD; S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICN7_9FIRM
L1_007_000M1_scaffold_702_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22983..23474)
DNA (492bp) protein (164aa)
UPF0234 protein BN533_02004 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INM9_9FIRM
UPF0234 protein BN533_02004 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_000M1_scaffold_702_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23535..24776)
DNA (1242bp) protein (414aa)
Metallophosphoesterase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9M3_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:CDB46992.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
metallophosphoesterase
L1_007_000M1_scaffold_702_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24963..26888)
DNA (1926bp) protein (642aa)
Glutamate--ammonia ligase catalytic domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9U8_9FIRM
Glutamate--ammonia ligase catalytic domain protein {ECO:0000313|EMBL:CDB46993.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
glutamine synthetase catalytic region
L1_007_000M1_scaffold_702_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27072..28106)
DNA (1035bp) protein (345aa)
DNA polymerase III delta subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKP7_9FIRM
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDB46994.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
DNA polymerase III subunit delta
L1_007_000M1_scaffold_702_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28127..30499)
DNA (2373bp) protein (791aa)
DNA internalization competence protein ComEC/Rec2-like protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICP5_9FIRM
DNA internalization competence protein ComEC/Rec2-like protein {ECO:0000313|EMBL:CDB46995.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L1_007_000M1_scaffold_702_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30499..31128)
DNA (630bp) protein (210aa)
Soluble ligand binding domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INQ7_9FIRM
Soluble ligand binding domain protein {ECO:0000313|EMBL:CDB46996.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
soluble ligand binding domain-containing protein
L1_007_000M1_scaffold_702_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(31269..33761)
DNA (2493bp) protein (831aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Leucine--tRNA ligase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9P1_9FIRM
leucyl-tRNA synthetase
L1_007_000M1_scaffold_702_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(34156..35250)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46998.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
major facilitator superfamily protein
Displaying items 1-30 of 37 in total

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