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L1_007_000M1_scaffold_718

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_718_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..402
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78415.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein conserved in cyanobacteria
L1_007_000M1_scaffold_718_2
unknown

Not on your lists

comp(455..619)
DNA (165bp) protein (55aa)

This feature has no annotations

L1_007_000M1_scaffold_718_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(644..1651)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78416.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted oxidoreductases of the aldo/keto reductase family
L1_007_000M1_scaffold_718_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1769..2326)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W5_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
translation elongation factor P (EF-P)
L1_007_000M1_scaffold_718_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2470..2994)
DNA (525bp) protein (175aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLK7_9FIRM
L1_007_000M1_scaffold_718_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2991..3494)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78803.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L1_007_000M1_scaffold_718_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3590..4951)
DNA (1362bp) protein (454aa)
Citrate synthase (EC:2.3.3.1 2.3.3.5)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W8_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_000M1_scaffold_718_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5490..6824
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Ruminococcus RepID=C6J7W9_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_000M1_scaffold_718_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6961..7410)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=2 Tax=Ruminococcus RepID=C6J7X0_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator NrdR
L1_007_000M1_scaffold_718_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8165..8944
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKS6_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA polymerase, sigma subunit, RpsG/SigG
L1_007_000M1_scaffold_718_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9084..11972)
DNA (2889bp) protein (963aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLD0_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:CDD78811.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L1_007_000M1_scaffold_718_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12180..13469)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78813.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L1_007_000M1_scaffold_718_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13480..13896)
DNA (417bp) protein (139aa)
Glycerol-3-phosphate cytidylyltransferase n=2 Tax=Ruminococcus RepID=C6J7X6_9FIRM
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:CDD78814.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycerol-3-phosphate cytidyltransferase
L1_007_000M1_scaffold_718_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13957..15216)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78815.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L1_007_000M1_scaffold_718_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15197..16231)
DNA (1035bp) protein (345aa)
wcwK; Capsular polysaccharide phosphotransferase WcwK (EC:2.7.-.-)
Capsular polysaccharide phosphotransferase wcwK n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLD3_9FIRM
Capsular polysaccharide phosphotransferase wcwK {ECO:0000313|EMBL:CDD78816.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_000M1_scaffold_718_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16239..17345)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78817.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycosyltransferase
L1_007_000M1_scaffold_718_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17408..18502)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78818.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_718_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18555..19295)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78819.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter-like protein
L1_007_000M1_scaffold_718_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19358..20134)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y2_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L1_007_000M1_scaffold_718_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20421..21263)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78821.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_718_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21279..22373)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78436.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_000M1_scaffold_718_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22392..23681)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78824.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative virion core protein (lumpy skin disease virus)
L1_007_000M1_scaffold_718_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24048..24455)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y6_9FIRM
Anti-sigma regulatory factor {ECO:0000313|EMBL:CDD78826.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_718_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24538..24840)
DNA (303bp) protein (101aa)
Anti-sigma factor antagonist n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN61_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative anti-sigma-factor antagonist
L1_007_000M1_scaffold_718_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25188..25610)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78911.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
flavodoxin, short chain
L1_007_000M1_scaffold_718_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25760..26296)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CME7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78912.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_718_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26730..30083)
DNA (3354bp) protein (1118aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78445.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATP-dependent dsDNA exonuclease
L1_007_000M1_scaffold_718_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30080..31243)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78924.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
exonuclease SbcD
L1_007_000M1_scaffold_718_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31284..32027)
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78447.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulators of sugar metabolism
L1_007_000M1_scaffold_718_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32322..32579)
DNA (258bp) protein (86aa)
HPr family phosphocarrier n=2 Tax=Ruminococcus RepID=C6J7Z6_9FIRM
HPr family phosphocarrier {ECO:0000313|EMBL:EES78448.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphotransferase System HPr (HPr) Family
Displaying items 1-30 of 35 in total

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