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L1_007_000M1_scaffold_782

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_782_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

135..1256
DNA (1122bp) protein (374aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRJ8_9BIFI
Glycosyltransferase {ECO:0000313|EMBL:BAR04206.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Capsular polysaccharide biosynthesis protein
L1_007_000M1_scaffold_782_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1253..2527
DNA (1275bp) protein (425aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRJ7_9BIFI
Glycosyltransferase {ECO:0000313|EMBL:BAR04207.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Glycosyltransferase
L1_007_000M1_scaffold_782_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2532..3947
DNA (1416bp) protein (472aa)
Polysaccharide biosynthesis protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRJ6_9BIFI
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EEG71290.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04208.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Membrane spanning polysaccharide biosynthesis protein
L1_007_000M1_scaffold_782_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3944..4981
DNA (1038bp) protein (346aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRJ5_9BIFI
Putative glycosyltransferase {ECO:0000313|EMBL:BAR04209.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
glycosyl transferase
L1_007_000M1_scaffold_782_5
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4985..5695
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A382_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15093.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_007_000M1_scaffold_782_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5722..6825
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRJ3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71287.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Hypothetical protein
L1_007_000M1_scaffold_782_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6850..7869
DNA (1020bp) protein (340aa)
Nitroreductase family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRJ2_9BIFI
Nitroreductase family protein {ECO:0000313|EMBL:EEG71286.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04212.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
nitroreductase
L1_007_000M1_scaffold_782_8
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7945..8190
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2E346_BIFBR
fhiA protein
FhiA protein {ECO:0000313|EMBL:AIZ15094.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_007_000M1_scaffold_782_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8298..9356
DNA (1059bp) protein (353aa)
Membrane spanning protein involved in polysaccharide biosynthesis n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1X4_BIFBU
Uncharacterized protein {ECO:0000313|EMBL:BAR04213.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Membrane spanning protein involved in polysaccharide biosynthesis
L1_007_000M1_scaffold_782_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9594..10439
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZK60_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76766.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L1_007_000M1_scaffold_782_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10436..10600
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRI9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71283.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_000M1_scaffold_782_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10899..11342)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRI7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71281.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
proline symporter
L1_007_000M1_scaffold_782_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11490..11819)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRI7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71281.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
proline symporter
L1_007_000M1_scaffold_782_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12359..13045)
DNA (687bp) protein (229aa)
Abi-like protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRI5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR04217.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
abi-like protein
L1_007_000M1_scaffold_782_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13042..13299)
DNA (258bp) protein (86aa)
Abi-like protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9C0_9BIFI
abi-like protein
Abi-like protein {ECO:0000313|EMBL:ADB08760.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_007_000M1_scaffold_782_16
unknown

Not on your lists

comp(13472..13636)
DNA (165bp) protein (55aa)

This feature has no annotations

L1_007_000M1_scaffold_782_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13683..14999)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRI4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71278.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_000M1_scaffold_782_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15471..17138)
DNA (1668bp) protein (556aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRI3_9BIFI
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EEG71277.1}; Undecaprenyl-phosphate sugar phosphotransferase {ECO:0000313|EMBL:BAR04219.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L1_007_000M1_scaffold_782_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17444..19384)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q3H8_9BIFI
Fimbrial assembly protein PilN {ECO:0000313|EMBL:EEG71276.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04220.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_000M1_scaffold_782_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19593..20609)
DNA (1017bp) protein (339aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRI1_9BIFI
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EEG71275.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04221.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_000M1_scaffold_782_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20910..21233
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRI0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71274.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_000M1_scaffold_782_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21252..22793)
DNA (1542bp) protein (514aa)
Drug resistance MFS transporter, drug:H+ antiporter-2 family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRH9_9BIFI
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EEG71273.1}; Putative transport protein {ECO:0000313|EMBL:BAR04223.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
MFS transporter
L1_007_000M1_scaffold_782_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23114..24274
DNA (1161bp) protein (387aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRH8_9BIFI
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEG71272.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_000M1_scaffold_782_24
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24285..25091)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NZ77_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16485.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
deoxyribonuclease
L1_007_000M1_scaffold_782_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25132..25986)
DNA (855bp) protein (285aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bifidobacterium RepID=C0BRH6_9BIFI
2,5-diketo-D-gluconic acid reductase {ECO:0000313|EMBL:KEF27958.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
dehydrogenase or reductase protein
L1_007_000M1_scaffold_782_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26233..27564
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NWI0_9BIFI
Manganese transporter {ECO:0000313|EMBL:KEF27959.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
H(+)-stimulated manganese uptake system protein
L1_007_000M1_scaffold_782_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27957..29033)
DNA (1077bp) protein (359aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRH2_9BIFI
Transcriptional regulator {ECO:0000313|EMBL:BAR04229.1}; Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEG71266.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
LacI family transcriptional regulator
L1_007_000M1_scaffold_782_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29185..31275)
DNA (2091bp) protein (697aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Beta-galactosidase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRH1_9BIFI
beta-galactosidase
L1_007_000M1_scaffold_782_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31520..32533)
DNA (1014bp) protein (338aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPY2_9BIFI
ABC transporter permease component {ECO:0000313|EMBL:BAR03192.1}; ABC transporter, permease protein {ECO:0000313|EMBL:EEG71545.1}; Sugar ABC transporter permease component {ECO:0000313|EMBL:BAR04231.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ABC transporter permease
L1_007_000M1_scaffold_782_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32591..33412)
DNA (822bp) protein (274aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPY3_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EEG71546.1}; Sugar ABC transporter permease component {ECO:0000313|EMBL:BAR03191.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ABC transporter permease
Displaying items 1-30 of 36 in total

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