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L1_007_000M1_scaffold_809

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_809_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1359)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76857.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Fe-S oxidoreductase, related to NifB/MoaA family
L1_007_000M1_scaffold_809_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1675..2844
DNA (1170bp) protein (390aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8L7_9FIRM
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EES78669.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_000M1_scaffold_809_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2971..3822)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8L8_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
conserved hypothetical protein TIGR00726
L1_007_000M1_scaffold_809_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3883..4248)
DNA (366bp) protein (122aa)
UPF0102 protein RSAG_00628 n=2 Tax=Ruminococcus RepID=C6J8L9_9FIRM
UPF0102 protein BN806_01415 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein TIGR00252
L1_007_000M1_scaffold_809_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4358..5113)
DNA (756bp) protein (252aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Ruminococcus RepID=C6J8M0_9FIRM
L1_007_000M1_scaffold_809_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5110..5955)
DNA (846bp) protein (282aa)
Ribosome biogenesis GTPase A n=2 Tax=Ruminococcus RepID=C6J8M1_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ribosome biogenesis GTP-binding protein YlqF
L1_007_000M1_scaffold_809_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5962..6567)
DNA (606bp) protein (202aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I P n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFY3_9FIRM
L1_007_000M1_scaffold_809_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6641..6988)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=2 Tax=Ruminococcus RepID=C6J8M3_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ribosomal protein L19, bacterial type
L1_007_000M1_scaffold_809_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7116..7991)
DNA (876bp) protein (292aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Ruminococcus RepID=C6J8M4_9FIRM
L1_007_000M1_scaffold_809_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8199..9131)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78677.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Outer membrane protein and related peptidoglycan-associated (lipo)proteins
L1_007_000M1_scaffold_809_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9147..10787)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76838.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_809_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11065..11679)
DNA (615bp) protein (205aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79351.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_000M1_scaffold_809_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11679..14096)
DNA (2418bp) protein (806aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Ruminococcus RepID=C6J8M8_9FIRM
L1_007_000M1_scaffold_809_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14201..15226)
DNA (1026bp) protein (342aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Ruminococcus RepID=C6J8M9_9FIRM
L1_007_000M1_scaffold_809_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15695..17089)
DNA (1395bp) protein (465aa)
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.14 1.4.1.13)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N0_9FIRM
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EES78682.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_000M1_scaffold_809_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17089..17976)
DNA (888bp) protein (296aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78683.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_000M1_scaffold_809_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18179..18931)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78684.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Protease subunit of ATP-dependent Clp proteases
L1_007_000M1_scaffold_809_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19042..19773)
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein RSAG_00642 n=2 Tax=Ruminococcus RepID=C6J8N3_9FIRM
Probable transcriptional regulatory protein BN806_00281 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein TIGR01033
L1_007_000M1_scaffold_809_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19815..21128)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78686.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Hemolysins and related proteins containing CBS domains
L1_007_000M1_scaffold_809_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21329..21676)
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
mRNA interferase n=2 Tax=Ruminococcus RepID=C6J8N5_9FIRM
Growth inhibitor
L1_007_000M1_scaffold_809_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21862..23007)
DNA (1146bp) protein (382aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N6_9FIRM
L1_007_000M1_scaffold_809_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23085..24584)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78689.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L1_007_000M1_scaffold_809_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24674..25321)
DNA (648bp) protein (216aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8N8_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
CoA-binding protein
L1_007_000M1_scaffold_809_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25582..27492
DNA (1911bp) protein (637aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79370.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_007_000M1_scaffold_809_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27609..28817)
DNA (1209bp) protein (403aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=2 Tax=Ruminococcus RepID=C6J8P0_9FIRM
L1_007_000M1_scaffold_809_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28933..29778)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78693.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Subtilisin-like serine proteases
L1_007_000M1_scaffold_809_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30089..30256
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LZ21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98891.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_000M1_scaffold_809_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30286..31017)
DNA (732bp) protein (244aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Ribosomal RNA small subunit methyltransferase J n=2 Tax=Ruminococcus RepID=C6J8P2_9FIRM
Protein of unknown function (DUF548).
L1_007_000M1_scaffold_809_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31038..32516)
DNA (1479bp) protein (493aa)
Polyphosphate:AMP phosphotransferase n=2 Tax=Ruminococcus RepID=C6J8P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79378.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_000M1_scaffold_809_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32626..32955)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78710.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Displaying items 1-30 of 33 in total

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