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L1_007_000M1_scaffold_914

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_914_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..131
DNA (129bp) protein (43aa)
Transposase and inactivated derivatives n=3 Tax=Roseburia intestinalis RepID=D4L0R1_9FIRM
Transposase and inactivated derivatives
Transposase and inactivated derivatives {ECO:0000313|EMBL:CBL13201.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_000M1_scaffold_914_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(462..3116)
DNA (2655bp) protein (885aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KW70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33379.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ABC-type transport system, permease
L1_007_000M1_scaffold_914_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(3109..3795)
DNA (687bp) protein (229aa)
ABC transporter ATP-binding protein n=1 Tax=Blautia producta RepID=UPI000372910A
Uncharacterized protein {ECO:0000313|EMBL:CDC45159.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC transporter ATP-binding protein
L1_007_000M1_scaffold_914_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3863..4780)
DNA (918bp) protein (306aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Two-component sensor histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B9E2_9CLOT
L1_007_000M1_scaffold_914_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4762..5436)
DNA (675bp) protein (225aa)
Transcriptional regulatory family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DE70_CLODI
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQF24746.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
two-component response regulator
L1_007_000M1_scaffold_914_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5781..5984
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77047.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Bacterial mobilisation protein (MobC).
L1_007_000M1_scaffold_914_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6021..6236)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77048.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
CHAP domain.
L1_007_000M1_scaffold_914_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6184..6489)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77048.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
CHAP domain.
L1_007_000M1_scaffold_914_9
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6953..7267)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V6T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93953.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Plasmid stabilisation system protein.
L1_007_000M1_scaffold_914_10
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7257..7544)
DNA (288bp) protein (96aa)
Addiction module antitoxin RelB/DinJ family n=1 Tax=Blautia sp. CAG:52 RepID=R6G645_9FIRM
Addiction module antitoxin RelB/DinJ family {ECO:0000313|EMBL:CDB19800.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
addiction module antitoxin, RelB/DinJ family
L1_007_000M1_scaffold_914_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7727..9979)
DNA (2253bp) protein (751aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEI0_9FIRM
L1_007_000M1_scaffold_914_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10253..11128
DNA (876bp) protein (292aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULF3_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ79133.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000M1_scaffold_914_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11158..11640)
DNA (483bp) protein (161aa)
Phosphatidylglycerophosphatase B n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTV7_9FIRM
Phosphatidylglycerophosphatase B {ECO:0000313|EMBL:CCZ79134.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phosphatidylglycerophosphatase B
L1_007_000M1_scaffold_914_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11653..12030)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79135.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_914_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12114..12473)
DNA (360bp) protein (120aa)
SpoVA protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6Q3_9FIRM
SpoVA protein {ECO:0000313|EMBL:CCZ79136.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sporulation protein
L1_007_000M1_scaffold_914_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12478..13518)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79137.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
stage V sporulation protein AD
L1_007_000M1_scaffold_914_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13578..14102)
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBB1_9FIRM
L1_007_000M1_scaffold_914_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14190..14885)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77988.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
methyltransferase, YaeB/AF_0241 family
L1_007_000M1_scaffold_914_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14894..17134)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77989.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
cyclic nucleotide-binding protein
L1_007_000M1_scaffold_914_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17138..19891)
DNA (2754bp) protein (918aa)
beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase family 3 domain-containing protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ02_9FIRM
Glycoside hydrolase family 3 domain-containing protein {ECO:0000313|EMBL:CCZ77990.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_914_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19969..20418)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77991.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_914_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20408..21070)
DNA (663bp) protein (221aa)
Stage V sporulation protein AA n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBB6_9FIRM
Stage V sporulation protein AA {ECO:0000313|EMBL:CCZ77992.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
stage V sporulation protein AA
L1_007_000M1_scaffold_914_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21185..21646)
DNA (462bp) protein (154aa)
SpoVA protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIA2_9FIRM
SpoVA protein {ECO:0000313|EMBL:CCZ77993.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
SpoVA protein.
L1_007_000M1_scaffold_914_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21729..22073)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77994.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_914_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22122..22781)
DNA (660bp) protein (220aa)
GTP pyrophosphokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ09_9FIRM
GTP pyrophosphokinase {ECO:0000313|EMBL:CCZ77995.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GTP pyrophosphokinase
L1_007_000M1_scaffold_914_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22935..23198)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77996.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_914_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23182..24000)
DNA (819bp) protein (273aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBD5_9FIRM
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CCZ77997.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNA methyltransferase, TrmH family, group 3
L1_007_000M1_scaffold_914_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24004..24438)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77998.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_914_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24435..25208)
DNA (774bp) protein (258aa)
Uncharacterized conserved protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQH6_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCZ77999.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_914_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25302..26273)
DNA (972bp) protein (324aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
6-phosphofructokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ35_9FIRM
6-phosphofructokinase
Displaying items 1-30 of 35 in total

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