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L1_007_000M1_scaffold_947

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_947_1
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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3..98
DNA (96bp) protein (32aa)
2-hydroxyglutaryl-CoA dehydratase activator HgdC n=3 Tax=root RepID=R5B1B0_9FIRM
2-hydroxyglutaryl-CoA dehydratase activator HgdC {ECO:0000313|EMBL:CCX45241.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hgdC; 2-hydroxyglutaryl-CoA dehydratase subunit C
L1_007_000M1_scaffold_947_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

111..266
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B7I6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47401.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_007_000M1_scaffold_947_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(572..739)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47404.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_007_000M1_scaffold_947_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(753..1196)
DNA (444bp) protein (148aa)
Stage V sporulation protein AC n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B7J2_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:CCX47406.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
stage V sporulation protein AC
L1_007_000M1_scaffold_947_5
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(1473..1928)
DNA (456bp) protein (152aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y460_9FIRM
L1_007_000M1_scaffold_947_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(1925..2332)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47410.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_007_000M1_scaffold_947_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

2524..2946
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B387_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47412.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_007_000M1_scaffold_947_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


2973..4670
DNA (1698bp) protein (566aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=3 Tax=root RepID=R5ARC2_9FIRM
Arginine--tRNA ligase {ECO:0000313|EMBL:CCX45493.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_007_000M1_scaffold_947_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(4979..5503)
DNA (525bp) protein (175aa)
Spore maturation protein B n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXP2_9FIRM
Spore maturation protein B {ECO:0000313|EMBL:CCX45492.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
spmB; spore maturation protein B
L1_007_000M1_scaffold_947_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(5500..6189)
DNA (690bp) protein (230aa)
Spore maturation protein A n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B224_9FIRM
Spore maturation protein A {ECO:0000313|EMBL:CCX45491.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
spmA; spore maturation protein A
L1_007_000M1_scaffold_947_11

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6424..6669
DNA (246bp) protein (82aa)
Transition state regulatory protein AbrB n=2 Tax=root RepID=R5AQ36_9FIRM
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EKC80131.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AbrB family transcriptional regulator
L1_007_000M1_scaffold_947_12
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(6732..7562)
DNA (831bp) protein (277aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D153_9FIRM
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
L1_007_000M1_scaffold_947_13
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7565..8356)
DNA (792bp) protein (264aa)
Methyltransferase type 11 n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CS39_9FIRM
putative methyltransferase
Tax=BJP_IG2069_Clostridiales_48_15
L1_007_000M1_scaffold_947_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(8391..8561)
DNA (171bp) protein (57aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXN6_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CCX45487.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
L1_007_000M1_scaffold_947_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

8791..11268
DNA (2478bp) protein (826aa)
ATPase AAA-2 domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B220_9FIRM
ATPase AAA-2 domain protein {ECO:0000313|EMBL:CCX45486.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ATPase AAA-2 domain-containing protein
L1_007_000M1_scaffold_947_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

11311..11763
DNA (453bp) protein (151aa)
Uncharacterized domain 1 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQ32_9FIRM
Uncharacterized domain 1 {ECO:0000313|EMBL:CCX45485.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
thioesterase superfamily protein
L1_007_000M1_scaffold_947_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(11817..12806)
DNA (990bp) protein (330aa)
Stage II sporulation protein D n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AU66_9FIRM
Stage II sporulation protein D {ECO:0000313|EMBL:CCX45484.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
spoIID; stage II sporulation protein D
L1_007_000M1_scaffold_947_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

12914..13720
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B5M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46781.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_007_000M1_scaffold_947_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

13800..14552
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46783.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
membrane protein
L1_007_000M1_scaffold_947_20
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

14565..15260
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46785.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
membrane protein
L1_007_000M1_scaffold_947_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

15257..16690
DNA (1434bp) protein (478aa)
Peptidase M20 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1C0_9FIRM
Peptidase M20 {ECO:0000313|EMBL:CCX46787.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_007_000M1_scaffold_947_22
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16805..18433)
DNA (1629bp) protein (543aa)
DAK2 domain protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CTC2_9FIRM
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_007_000M1_scaffold_947_23

Not on your lists

comp(18551..18904)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=root RepID=R5AQJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKC56505.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_947_24
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

19190..22726
DNA (3537bp) protein (1179aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
pyruvate-ferredoxin (flavodoxin) oxidoreductase (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=2 Tax=root RepID=R5B2I0_9FIRM
L1_007_000M1_scaffold_947_25
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22918..23610
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CAT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA73713.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L1_007_000M1_scaffold_947_26
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(23874..24752)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1P3K7_9FLAO
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
L1_007_000M1_scaffold_947_27

Not on your lists

25010..25888
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=root RepID=R5AY19_9FIRM
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EKC59931.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
small-conductance mechanosensitive channel
L1_007_000M1_scaffold_947_28
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


25995..26291
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=2 Tax=root RepID=R5ARP7_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpsF; 30S ribosomal protein S6
L1_007_000M1_scaffold_947_29
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

26304..26774
DNA (471bp) protein (157aa)
Single-stranded DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUK9_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ssb; single-stranded DNA-binding protein
L1_007_000M1_scaffold_947_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


26799..27038
DNA (240bp) protein (80aa)
30S ribosomal protein S18 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQJ4_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpsR; 30S ribosomal protein S18
Displaying items 1-30 of 55 in total

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