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L1_007_000M1_scaffold_951

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_951_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1118)
DNA (1116bp) protein (372aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KFI70003.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KFI70003.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Branched-chain amino acid aminotransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU08_BIFLJ
branched-chain amino acid aminotransferase
L1_007_000M1_scaffold_951_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1342..1962)
DNA (621bp) protein (207aa)
50S ribosomal protein L25 n=17 Tax=Bifidobacterium RepID=RL25_BIFLD
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000M1_scaffold_951_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2391..3428
DNA (1038bp) protein (346aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G5Z6_BIFLO
alpha/beta fold family hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:KEY32858.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_000M1_scaffold_951_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3564..4988)
DNA (1425bp) protein (475aa)
NAD/NADP transhydrogenase beta subunit (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
NAD(P) transhydrogenase subunit beta n=5 Tax=Bifidobacterium longum subsp. longum RepID=D6D8U4_BIFLN
L1_007_000M1_scaffold_951_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4988..5293)
DNA (306bp) protein (102aa)
NAD(P) transhydrogenase alpha-2 subunit n=15 Tax=Bifidobacterium RepID=B7GS77_BIFLS
NAD(P) transhydrogenase alpha-2 subunit
NAD(P) transhydrogenase alpha-2 subunit {ECO:0000313|EMBL:BAP83473.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_000M1_scaffold_951_6
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5309..6472)
DNA (1164bp) protein (388aa)
NAD/NADP transhydrogenase alpha subunit n=13 Tax=Bifidobacterium RepID=D6D8U6_BIFLN
NAD(P) transhydrogenase alpha-1 subunit
NAD(P) transhydrogenase subunit alpha part 1 {ECO:0000313|EMBL:CCY95948.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_000M1_scaffold_951_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6891..8924
DNA (2034bp) protein (678aa)
Long-chain acyl-CoA synthetase n=3 Tax=Bifidobacterium longum RepID=B3DSB9_BIFLD
long-chain-fatty-acid-CoA ligase
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:ACD98038.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_000M1_scaffold_951_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8977..10041)
DNA (1065bp) protein (355aa)
GTPase Era n=11 Tax=Bifidobacterium longum RepID=B3DSC0_BIFLD
era; era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_000M1_scaffold_951_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10043..11476)
DNA (1434bp) protein (478aa)
Hemolysin-like protein n=13 Tax=Bifidobacterium longum RepID=B3DSC1_BIFLD
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AIW43705.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_000M1_scaffold_951_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11552..12100)
DNA (549bp) protein (183aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Endoribonuclease YbeY n=17 Tax=Bifidobacterium RepID=YBEY_BIFLD
hypothetical protein
L1_007_000M1_scaffold_951_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12090..13265)
DNA (1176bp) protein (392aa)
Phosphate starvation-inducible protein n=15 Tax=Bifidobacterium RepID=B3DSC3_BIFLD
phosphate starvation-inducible protein
Phosphate starvation-inducible protein {ECO:0000313|EMBL:ACD98042.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_000M1_scaffold_951_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13284..13622)
DNA (339bp) protein (113aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=10 Tax=Bifidobacterium RepID=D6D8V0_BIFLN
hit2; hit2
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADH00353.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_000M1_scaffold_951_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13671..14468)
DNA (798bp) protein (266aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Ribosomal RNA small subunit methyltransferase E n=17 Tax=Bifidobacterium RepID=B3DSC5_BIFLD
hypothetical protein
L1_007_000M1_scaffold_951_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14712..15590
DNA (879bp) protein (293aa)
rRNA methylase n=11 Tax=Bifidobacterium RepID=B3DSC6_BIFLD
spoU1; spou1
rRNA methylase {ECO:0000313|EMBL:ACD98045.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_000M1_scaffold_951_15
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15791..17035
DNA (1245bp) protein (415aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5N1Z4_9BIFI
glucose-1-phosphate adenylyltransferase
L1_007_000M1_scaffold_951_16
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17125..17718)
DNA (594bp) protein (198aa)
Predicted metal-sulfur cluster biosynthetic enzyme n=14 Tax=Bifidobacterium RepID=D6D8V4_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95938.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_000M1_scaffold_951_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17725..18279)
DNA (555bp) protein (185aa)
Uncharacterized protein n=19 Tax=Bifidobacterium RepID=B3DSC9_BIFLD
hypothetical protein
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KEY32844.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_007_000M1_scaffold_951_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18291..20393)
DNA (2103bp) protein (701aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Cysteine desulfurase n=10 Tax=Bifidobacterium RepID=B3DSD0_BIFLD
csdB; selenocysteine lyase
L1_007_000M1_scaffold_951_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20419..21654)
DNA (1236bp) protein (412aa)
ABC-type transport system for Fe-S cluster assembly permease component n=14 Tax=Bifidobacterium RepID=B3DSD2_BIFLD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIW43694.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_000M1_scaffold_951_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21660..23159)
DNA (1500bp) protein (500aa)
Putative ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MT32_BIFL1
ABC transporter permease
Putative ABC transporter permease component {ECO:0000313|EMBL:BAJ70926.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_000M1_scaffold_951_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23381..24976)
DNA (1596bp) protein (532aa)
Peptidoglycan transpeptidase, ErfK-YbiS-YhnG family n=8 Tax=Bifidobacterium longum RepID=D6D8W0_BIFLN
hypothetical protein
Peptidoglycan transpeptidase, ErfK-YbiS-YhnG family {ECO:0000313|EMBL:CBK70613.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_000M1_scaffold_951_22
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25222..26883)
DNA (1662bp) protein (554aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
CTP synthase n=17 Tax=Bifidobacterium RepID=PYRG_BIFLO
pyrG; pyrg
L1_007_000M1_scaffold_951_23
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27029..27970)
DNA (942bp) protein (314aa)
PePV n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R445_BIFLM
pepV; pepv
Dipeptidase putative {ECO:0000313|EMBL:CCY95930.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_000M1_scaffold_951_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28215..28661)
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
3-dehydroquinate dehydratase n=15 Tax=Bifidobacterium RepID=B3DSD7_BIFLD
3-dehydroquinate dehydratase
L1_007_000M1_scaffold_951_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28825..30447)
DNA (1623bp) protein (541aa)
Bifunctional shikimate kinase/3-dehydroquinate synthase n=12 Tax=Bifidobacterium RepID=AROKB_BIFLO
3-dehydroquinate synthase {ECO:0000313|EMBL:KEY22114.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
shikimate kinase
L1_007_000M1_scaffold_951_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30530..31717)
DNA (1188bp) protein (396aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Chorismate synthase n=14 Tax=Bifidobacterium RepID=AROC_BIFLD
chorismate synthase
L1_007_000M1_scaffold_951_27
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31781..32254
DNA (474bp) protein (158aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=C2GTK5_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95926.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_000M1_scaffold_951_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32422..33603)
DNA (1182bp) protein (394aa)
YceG like protein n=2 Tax=Bifidobacterium longum RepID=S3DLK6_BIFLN
hypothetical protein
YceG family protein {ECO:0000313|EMBL:EIJ28473.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_000M1_scaffold_951_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33614..34072)
DNA (459bp) protein (153aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Putative Holliday junction resolvase n=8 Tax=Bifidobacterium RepID=RUVX_BIFLD
endonuclease for recombination
L1_007_000M1_scaffold_951_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(34081..36762)
DNA (2682bp) protein (894aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Alanine--tRNA ligase n=11 Tax=Bifidobacterium RepID=SYA_BIFLO
alanyl-tRNA synthase
Displaying items 1-30 of 60 in total

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