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L1_007_000M1_scaffold_952

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_952_1
unknown

Not on your lists

comp(1..339)
DNA (339bp) protein (113aa)

This feature has no annotations

L1_007_000M1_scaffold_952_2
unknown

Not on your lists

comp(422..682)
DNA (261bp) protein (87aa)

This feature has no annotations

L1_007_000M1_scaffold_952_3
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(722..1858)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MHB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70385.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
IgA Peptidase M64./Fibronectin type III domain.
L1_007_000M1_scaffold_952_4
unknown

Not on your lists

comp(1911..2300)
DNA (390bp) protein (130aa)

This feature has no annotations

L1_007_000M1_scaffold_952_5
Firmicutes bacterium CAG:884, Firmicutes, Bacteria

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comp(2395..2763)
DNA (369bp) protein (123aa)
Chitinase (EC:3.2.1.14)
PF03382 family protein n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MS08_9FIRM
PF03382 family protein {ECO:0000313|EMBL:CCY94500.1}; TaxID=1262990 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:884.;"
L1_007_000M1_scaffold_952_6
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2810..4621)
DNA (1812bp) protein (604aa)
Sigma-70 region 4 n=1 Tax=Coprococcus comes CAG:19 RepID=R6MGS9_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CDB85107.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
RNA polymerase sigma factor, sigma-70 family
L1_007_000M1_scaffold_952_7
unknown

Not on your lists

comp(4717..5289)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Lactobacillus versmoldensis RepID=UPI000249343B
L1_007_000M1_scaffold_952_8
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5651..6001
DNA (351bp) protein (117aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP7_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO58309.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L1_007_000M1_scaffold_952_9
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6111..6746)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5CZ39_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Predicted membrane protein
L1_007_000M1_scaffold_952_10
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7140..8048)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D8H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73152.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_952_11
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8105..10261)
DNA (2157bp) protein (719aa)
Tex-like protein N-terminal domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DBA6_9FIRM
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CCX73151.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Transcriptional accessory protein
L1_007_000M1_scaffold_952_12
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10443..11051
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5CZ12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73150.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Transcriptional regulator
L1_007_000M1_scaffold_952_13
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11055..11999
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D2Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73149.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L1_007_000M1_scaffold_952_14
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12013..12837
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5CZ36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73148.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Glycerophosphoryl diester phosphodiesterase
L1_007_000M1_scaffold_952_15
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12940..13608
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D8H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73147.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
PAP2 superfamily.
L1_007_000M1_scaffold_952_16
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13777..15507)
DNA (1731bp) protein (577aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
Sugar fermentation stimulation protein homolog n=1 Tax=Dorea sp. CAG:105 RepID=R5DBA3_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000313|EMBL:CCX73146.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_952_17
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15494..16168)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5CZ07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73145.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_952_18
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16270..16794)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D2X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73144.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
L1_007_000M1_scaffold_952_19
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16872..17936)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5CZ33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73143.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Predicted membrane protein, putative toxin regulator
L1_007_000M1_scaffold_952_20
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18122..18385
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D8H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73142.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_952_21
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18400..18651
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DB99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73141.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_007_000M1_scaffold_952_22
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18806..20440)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D8G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73132.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Na/Pi-cotransporter II-like protein
L1_007_000M1_scaffold_952_23
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20607..20963)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5CYZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73130.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
stage V sporulation protein AE
L1_007_000M1_scaffold_952_24
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21042..22058)
DNA (1017bp) protein (339aa)
Stage V sporulation protein AD n=1 Tax=Dorea sp. CAG:105 RepID=R5CZ18_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CCX73128.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Stage V sporulation protein AD (SpoVAD).
L1_007_000M1_scaffold_952_25
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22061..22540)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DB88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73126.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
stage V sporulation AC, SpoVAC
L1_007_000M1_scaffold_952_26
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22545..22964)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SHZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC59550.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L1_007_000M1_scaffold_952_27
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22924..23580)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D2W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73124.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Stage V sporulation protein AA.
L1_007_000M1_scaffold_952_28
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23564..23731)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5CZ14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73123.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L1_007_000M1_scaffold_952_29
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23796..24509)
DNA (714bp) protein (238aa)
RNA polymerase sigma factor n=1 Tax=Dorea sp. CAG:105 RepID=R5D8F4_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
RNA polymerase sigma-F factor
L1_007_000M1_scaffold_952_30
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24488..24943)
DNA (456bp) protein (152aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Dorea sp. CAG:105 RepID=R5DB83_9FIRM
Anti-sigma F factor {ECO:0000313|EMBL:CCX73121.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Displaying items 1-30 of 35 in total

View Taxonomy