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L1_007_000M1_scaffold_960

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_960_1
unknown

Not on your lists

146..391
DNA (246bp) protein (82aa)

This feature has no annotations

L1_007_000M1_scaffold_960_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(527..1123)
DNA (597bp) protein (199aa)
Cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5Z3_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CCY32196.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_960_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1442..2260
DNA (819bp) protein (273aa)
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5A8_9FIRM
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:CCY32197.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
L1_007_000M1_scaffold_960_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2250..2735
DNA (486bp) protein (162aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs (EC:1.2.99.2)
Xanthine dehydrogenase iron-sulfur-binding subunit n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HR22_9FIRM
Xanthine dehydrogenase iron-sulfur-binding subunit {ECO:0000313|EMBL:CCY32198.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_960_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2732..5020
DNA (2289bp) protein (763aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase molybdenum binding subunit apoprotein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVP6_9FIRM
Xanthine dehydrogenase molybdenum binding subunit apoprotein {ECO:0000313|EMBL:CCY32199.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_960_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5024..6031
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F7733B
Uncharacterized protein {ECO:0000313|EMBL:CCY98253.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_007_000M1_scaffold_960_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6043..6819
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98252.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_007_000M1_scaffold_960_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7259..8881
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32202.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
transporter, NhaC family (TC 2.A.35)
L1_007_000M1_scaffold_960_9
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9824..11953
DNA (2130bp) protein (710aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HR26_9FIRM
L1_007_000M1_scaffold_960_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12246..13187
DNA (942bp) protein (314aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVQ0_9FIRM
L1_007_000M1_scaffold_960_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13635..14561
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33590.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_960_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14766..16199)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IA01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33591.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted xylanase/chitin deacetylase
L1_007_000M1_scaffold_960_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16422..17207
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33592.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_960_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17519..19756
DNA (2238bp) protein (746aa)
NlpC/P60 family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HUW2_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CCY33593.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_007_000M1_scaffold_960_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19983..20621)
DNA (639bp) protein (213aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Phosphate propanoyltransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZN7_9FIRM
propanediol utilization protein
L1_007_000M1_scaffold_960_16
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20751..21638
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33595.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_960_17
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21635..23095
DNA (1461bp) protein (487aa)
Predicted metallopeptidase (DUF2201) n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IA06_9FIRM
Predicted metallopeptidase (DUF2201) {ECO:0000313|EMBL:CCY33596.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted metallopeptidase (DUF2201).
L1_007_000M1_scaffold_960_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23297..24808
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33597.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
AAA domain (dynein-related subfamily).
L1_007_000M1_scaffold_960_19
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24818..26062
DNA (1245bp) protein (415aa)
Transglutaminase-like superfamily n=2 Tax=Clostridiales RepID=D4LGA0_9FIRM
Transglutaminase-like superfamily.
Uncharacterized protein {ECO:0000313|EMBL:ERI94612.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_000M1_scaffold_960_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26084..27064
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33599.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_960_21
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27218..28159)
DNA (942bp) protein (314aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV62_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CCY33600.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_007_000M1_scaffold_960_22
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28174..29193)
DNA (1020bp) protein (340aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IA11_9FIRM
L1_007_000M1_scaffold_960_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29221..30117)
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I9F9_9FIRM
L1_007_000M1_scaffold_960_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30313..31509)
DNA (1197bp) protein (399aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HUW8_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CCY33603.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_007_000M1_scaffold_960_25
unknown

Not on your lists

31594..31737
DNA (144bp) protein (48aa)

This feature has no annotations

L1_007_000M1_scaffold_960_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31810..32550
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HZP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33604.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_960_27
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32846..33571
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33605.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_000M1_scaffold_960_28
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33902..36016
DNA (2115bp) protein (705aa)
Putative phage tail component domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRE2_9FIRM
Putative phage tail component domain protein {ECO:0000313|EMBL:EDM87760.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_000M1_scaffold_960_29
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36013..36918
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D6D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD85343.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L1_007_000M1_scaffold_960_30
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36894..38735
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D4R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD85345.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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