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L1_007_000M1_scaffold_2042

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2042_1
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..432
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UP52_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52607.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
signal transduction protein
L1_007_000M1_scaffold_2042_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

689..1252
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJB5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95104.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Protein of unknown function (DUF1393).
L1_007_000M1_scaffold_2042_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1249..2487
DNA (1239bp) protein (413aa)
Bifunctional protein FolC n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNS7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07454.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
L1_007_000M1_scaffold_2042_4
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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2995..4344
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99195.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
MATE efflux family protein
L1_007_000M1_scaffold_2042_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

4394..5068
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NRP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC00392.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_007_000M1_scaffold_2042_6
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5280..6626)
DNA (1347bp) protein (449aa)
glutamate dehydrogenase (NADP) (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MIN4_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L1_007_000M1_scaffold_2042_7
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(6666..8066)
DNA (1401bp) protein (467aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.-)
Glutamate synthase (NADPH) homotetrameric n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N2B6_9FIRM
Glutamate synthase (NADPH) homotetrameric {ECO:0000313|EMBL:CDC00471.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_007_000M1_scaffold_2042_8
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8059..8907)
DNA (849bp) protein (283aa)
Ferredoxin-NADP(+) reductase subunit alpha {ECO:0000313|EMBL:EMS74160.1}; EC=1.18.1.2 {ECO:0000313|EMBL:EMS74160.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Ferredoxin-NADP(+) reductase subunit alpha n=1 Tax=Clostridium termitidis CT1112 RepID=S0FPK7_9CLOT
2-polyprenylphenol 6-hydroxylase
L1_007_000M1_scaffold_2042_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9342..9998)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HV17_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CEO04428.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L1_007_000M1_scaffold_2042_10
unknown

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10113..10445
DNA (333bp) protein (111aa)

This feature has no annotations

L1_007_000M1_scaffold_2042_11
Listeria booriae, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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10578..11087
DNA (510bp) protein (170aa)
Membrane protein putative n=1 Tax=Clostridium sp. CAG:138 RepID=R6APT5_9CLOT
Membrane protein {ECO:0000313|EMBL:KGL39853.1}; TaxID=1552123 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria booriae.;"
membrane protein
L1_007_000M1_scaffold_2042_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11203..12129
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C071_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75561.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L1_007_000M1_scaffold_2042_13
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12211..13668
DNA (1458bp) protein (486aa)
gltA; citrate synthase GltA (EC:2.3.3.1)
citrate synthase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E74E
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L1_007_000M1_scaffold_2042_14
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13890..14363
DNA (474bp) protein (158aa)
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DYN1_CLOSO
RNA polymerase sigma factor {ECO:0000313|EMBL:CEN75062.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
RNA polymerase sigma factor
L1_007_000M1_scaffold_2042_15
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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14384..15154
DNA (771bp) protein (257aa)
Conserved protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NAB4_9FIRM
Conserved protein {ECO:0000313|EMBL:CDB94857.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_007_000M1_scaffold_2042_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15280..15831)
DNA (552bp) protein (184aa)
GCN5-like N-acetyltransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MV63_CLOSA
GCN5-like N-acetyltransferase
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AGX44398.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_000M1_scaffold_2042_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15862..16404)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37765.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
acetyltransferase, ribosomal protein N-acetylase
L1_007_000M1_scaffold_2042_18
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(16401..18557)
DNA (2157bp) protein (719aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y677_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEF68515.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
signaling protein
L1_007_000M1_scaffold_2042_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18633..19007)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37113.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
cytidine/deoxycytidylate deaminase family protein
L1_007_000M1_scaffold_2042_20
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19076..20596)
DNA (1521bp) protein (507aa)
Sodium/proline symporter n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1D8I1_9FIRM
sodium:proline symporter
Tax=BJP_IG2103_Clostridiales_50_15
L1_007_000M1_scaffold_2042_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20741..23071)
DNA (2331bp) protein (777aa)
Cadmium-exporting ATPase n=1 Tax=Clostridium sp. D5 RepID=F0Z091_9CLOT
Cadmium-exporting ATPase {ECO:0000313|EMBL:EGB92512.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000M1_scaffold_2042_22
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23271..25388
DNA (2118bp) protein (706aa)
S-layer domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXY5_CLOA9
S-layer protein
S-layer domain-containing protein {ECO:0000313|EMBL:AFS77642.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L1_007_000M1_scaffold_2042_23
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25426..25797)
DNA (372bp) protein (124aa)
Cadmium efflux system accessory protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UMY8_9CLOT
Cadmium efflux system accessory protein {ECO:0000313|EMBL:CDC81566.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
transcriptional regulator
L1_007_000M1_scaffold_2042_24
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25819..26148)
DNA (330bp) protein (110aa)
Cupin domain n=2 Tax=Ruminococcus RepID=D4L7F8_9FIRM
Cupin {ECO:0000313|EMBL:KEZ89294.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Cupin domain.
L1_007_000M1_scaffold_2042_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26173..26793)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75966.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000M1_scaffold_2042_26
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26861..28366)
DNA (1506bp) protein (502aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
Lysine--tRNA ligase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I5W4_CLOCE
lysyl-tRNA synthetase
L1_007_000M1_scaffold_2042_27
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28404..28877)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=2 Tax=Clostridium RepID=A7VST5_9CLOT
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_007_000M1_scaffold_2042_28
unknown

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comp(28990..29541)
DNA (552bp) protein (184aa)

This feature has no annotations

L1_007_000M1_scaffold_2042_29
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(29582..29830)
DNA (249bp) protein (83aa)
Carboxyl-terminal protease n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NR35_9FIRM
Carboxyl-terminal protease {ECO:0000313|EMBL:CDC00127.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
carboxyl-terminal protease
L1_007_000M1_scaffold_2042_30
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29805..30761)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037BD96F
Peptidase S41 {ECO:0000313|EMBL:KHS56462.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
carboxyl-terminal protease
Displaying items 1-30 of 39 in total

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