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L1_007_000M1_scaffold_2062

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2062_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..416)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I8VD69_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR38790.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_2062_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(474..971)
DNA (498bp) protein (166aa)
Transcriptional regulator, AraC family n=5 Tax=Bacteroides RepID=C6YZY6_9BACE
transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS53255.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_2062_3
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1467..1640
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1ULC1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27757.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000M1_scaffold_2062_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1646..2551
DNA (906bp) protein (302aa)
Zinc transport system substrate-binding protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HB35_BACVU
Zinc transport system substrate-binding protein {ECO:0000313|EMBL:EOR98369.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
metal ABC transporter substrate-binding
L1_007_000M1_scaffold_2062_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2561..3328
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=C3RAH3_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EET14202.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
metal ABC transporter ATP-binding protein
L1_007_000M1_scaffold_2062_6
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3789..7193
DNA (3405bp) protein (1135aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6YZY3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV69236.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_007_000M1_scaffold_2062_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7264..7875
DNA (612bp) protein (204aa)
Polysaccharide deacetylase n=7 Tax=Bacteroides RepID=A6KZD1_BACV8
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:EFV69235.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L1_007_000M1_scaffold_2062_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7933..9105)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=7 Tax=root RepID=C6YZY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS53249.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_2062_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9202..10005)
DNA (804bp) protein (268aa)
gluconate 5-dehydrogenase (EC:1.1.1.69)
Gluconate 5-dehydrogenase n=14 Tax=Bacteroides RepID=C3PWU9_9BACE
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:EOR98374.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_2062_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10042..10548)
DNA (507bp) protein (169aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=3 Tax=Bacteroides RepID=D4VAB5_BACVU
L1_007_000M1_scaffold_2062_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10493..10831)
DNA (339bp) protein (113aa)
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=4 Tax=Bacteroides RepID=A6KZD4_BACV8
L1_007_000M1_scaffold_2062_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11002..12402)
DNA (1401bp) protein (467aa)
Putative exported D-alanyl-D-alanine carboxypeptidase penicillin-binding protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KZD5_BACV8
exported D-alanyl-D-alanine carboxypeptidase penicillin-binding protein
Putative exported D-alanyl-D-alanine carboxypeptidase penicillin-binding protein {ECO:0000313|EMBL:ABR38799.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_2062_13
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12402..13742)
DNA (1341bp) protein (447aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NZX6_9BACE
dihydrolipoamide dehydrogenase
L1_007_000M1_scaffold_2062_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13786..14139)
DNA (354bp) protein (118aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KZD7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET14194.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000M1_scaffold_2062_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14143..14502)
DNA (360bp) protein (120aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KZD8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98379.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_2062_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14578..14751)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H3L8_BACVU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS33950.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_2062_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14783..14965)
DNA (183bp) protein (61aa)
Uncharacterized protein n=15 Tax=root RepID=A6KZD9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS33950.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_2062_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15121..16701
DNA (1581bp) protein (527aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L-aspartate oxidase n=6 Tax=Bacteroides RepID=C6YZX3_9BACE
exported L-aspartate oxidase
L1_007_000M1_scaffold_2062_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16712..16834)
DNA (123bp) protein (41aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1ULW9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR98382.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_2062_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16951..18678
DNA (1728bp) protein (576aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAA8_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17111.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_007_000M1_scaffold_2062_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18727..19380)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAA7_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17110.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_007_000M1_scaffold_2062_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19377..20036)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9UBA3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOR98384.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_007_000M1_scaffold_2062_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20053..22194)
DNA (2142bp) protein (714aa)
Pectate lyase {ECO:0000313|EMBL:EFG17109.1}; EC=4.2.2.2 {ECO:0000313|EMBL:EFG17109.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Pectate lyase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAA6_BACVU
polysaccharide lyase 10, pectate lyase
L1_007_000M1_scaffold_2062_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22463..24772)
DNA (2310bp) protein (770aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAA5_BACVU
Putative lipoprotein {ECO:0000313|EMBL:KDS53236.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_2062_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24792..26831)
DNA (2040bp) protein (680aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAA4_BACVU
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS53235.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_2062_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26844..30179)
DNA (3336bp) protein (1112aa)
TonB-linked outer membrane protein, SusC/RagA family n=9 Tax=Bacteroides RepID=C6YZW6_9BACE
collagen-binding protein
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS33943.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_2062_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30265..30441)
DNA (177bp) protein (59aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1ULC2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79681.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_2062_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30709..32952)
DNA (2244bp) protein (748aa)
Peptidase, S9A/B/C familie, catalytic domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAA2_BACVU
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:KDS53232.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
peptidase
L1_007_000M1_scaffold_2062_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32964..35315)
DNA (2352bp) protein (784aa)
F5/8 type C domain protein n=2 Tax=Bacteroides RepID=C6YZW4_9BACE
F5/8 type C domain protein {ECO:0000313|EMBL:EET14182.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_007_000M1_scaffold_2062_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35386..36387)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H2V7_BACVU
Glycosyl hydrolases 43 family protein {ECO:0000313|EMBL:KDS53230.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
glycoside hydrolase
Displaying 30 items

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