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L1_007_000M1_scaffold_2190

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2190_1
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3..572
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LFX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY04267.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L1_007_000M1_scaffold_2190_2
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

697..1140
DNA (444bp) protein (148aa)
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:AEC01481.1}; EC=3.1.21.4 {ECO:0000313|EMBL:AEC01481.1};; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
Type II site-specific deoxyribonuclease n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GKS2_SPICD
type II site-specific deoxyribonuclease
L1_007_000M1_scaffold_2190_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1220..4036
DNA (2817bp) protein (939aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06433.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC transporter
L1_007_000M1_scaffold_2190_4
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4285..4719)
DNA (435bp) protein (145aa)
Single-stranded DNA-binding protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LDD9_ACEWD
ssb1; single-strand binding protein Ssb1
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L1_007_000M1_scaffold_2190_5
unknown

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comp(4868..5089)
DNA (222bp) protein (74aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_6
unknown

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comp(5082..5399)
DNA (318bp) protein (106aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5676..7622)
DNA (1947bp) protein (649aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
DNA topoisomerase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L218_9FIRM
traE; Prokaryotic type I DNA topoisomerase
L1_007_000M1_scaffold_2190_8
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7788..8300)
DNA (513bp) protein (171aa)
Nuclease (SNase domain protein) n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=A7HL24_FERNB
Uncharacterized protein {ECO:0000313|EMBL:KGF08636.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
nuclease
L1_007_000M1_scaffold_2190_9
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(8297..10504)
DNA (2208bp) protein (736aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PYH5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO77164.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
domain of unknown function DUF1738
L1_007_000M1_scaffold_2190_10
unknown

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comp(10755..10946)
DNA (192bp) protein (64aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_11
unknown

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comp(10972..11451)
DNA (480bp) protein (160aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_12
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(11399..12967)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DJ18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU77390.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
MobA/MobL protein
L1_007_000M1_scaffold_2190_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13230..13943
DNA (714bp) protein (238aa)
Conjugal transfer protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L1Y6_9FIRM
Conjugal transfer protein {ECO:0000313|EMBL:EGL76772.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L1_007_000M1_scaffold_2190_14
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13940..14914
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9CZH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU77388.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
Conjugal transfer protein TrbG/VirB9/CagX
L1_007_000M1_scaffold_2190_15
unknown

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14907..15449
DNA (543bp) protein (181aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15449..16144
DNA (696bp) protein (232aa)
Bacterial conjugation TrbI-like protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L1Z1_9FIRM
Bacterial conjugation TrbI-like protein {ECO:0000313|EMBL:EGL76761.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
trbIb; conjugal transfer protein TrbI
L1_007_000M1_scaffold_2190_17
unknown

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16212..16415
DNA (204bp) protein (68aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_18
unknown

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16449..16673
DNA (225bp) protein (75aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_19
unknown

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16661..16930
DNA (270bp) protein (90aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_20
unknown

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16946..17092
DNA (147bp) protein (49aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_21
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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17093..19201
DNA (2109bp) protein (703aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DJ16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU77385.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
TRAG family protein
L1_007_000M1_scaffold_2190_22
unknown

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19206..19538
DNA (333bp) protein (111aa)

This feature has no annotations

L1_007_000M1_scaffold_2190_23
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19531..20511
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9CZG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU77383.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
P-type conjugative transfer ATPase TrbB
L1_007_000M1_scaffold_2190_24
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20576..20851)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IQT9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW23289.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
L1_007_000M1_scaffold_2190_25
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(20848..21066)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:486 RepID=R6AEK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA50413.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
hypothetical protein
L1_007_000M1_scaffold_2190_26
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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21265..21597
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00036BF6CE
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EPP14487.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Conjugal transfer protein TrbC
L1_007_000M1_scaffold_2190_27
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21693..21935
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DJ12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU77380.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L1_007_000M1_scaffold_2190_28
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21943..24396
DNA (2454bp) protein (818aa)
Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L1Z8_9FIRM
Type IV secretion/conjugal transfer ATPase, VirB4 family {ECO:0000313|EMBL:EGL76756.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
CagE, TrbE, VirB component of type IV transporter system, conserved region
L1_007_000M1_scaffold_2190_29
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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24497..25297
DNA (801bp) protein (267aa)
Conserved domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L200_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EGL76776.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L1_007_000M1_scaffold_2190_30
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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25299..26276
DNA (978bp) protein (326aa)
Conserved domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L201_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EGL76766.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
P-type conjugative transfer protein TrbL
Displaying items 1-30 of 43 in total

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