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L1_007_000M1_scaffold_2240

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2240_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(181..777)
-----------------
DNA (597bp)
protein (199aa)
VCBS n=3 Tax=Bacteroides vulgatus RepID=I9UH97_BACVU
VCBS {ECO:0000313|EMBL:EIY81911.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000M1_scaffold_2240_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(983..2698)
-----------------
DNA (1716bp)
protein (572aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z452_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS55617.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
putative outer membrane protein probably involved in nutrient binding
L1_007_000M1_scaffold_2240_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2712..5750)
-----------------
DNA (3039bp)
protein (1013aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HQ00_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS05964.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
putative TonB-linked outer membrane protein
L1_007_000M1_scaffold_2240_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5993..8812
-----------------
DNA (2820bp)
protein (940aa)
Transcriptional regulator, AraC family n=2 Tax=root RepID=D4VD15_BACVU
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS55619.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
AraC family transcriptional regulator
L1_007_000M1_scaffold_2240_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8917..9768)
-----------------
DNA (852bp)
protein (284aa)
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:EFG16317.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EFG16317.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=2 Tax=Bacteroides vulgatus RepID=D4VD14_BACVU
nicotinate-nucleotide pyrophosphorylase
L1_007_000M1_scaffold_2240_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9849..10322
-----------------
DNA (474bp)
protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Ribosomal RNA large subunit methyltransferase H n=5 Tax=root RepID=D4VD13_BACVU
rRNA large subunit methyltransferase
L1_007_000M1_scaffold_2240_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10272..11114)
-----------------
DNA (843bp)
protein (281aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VD12_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS05960.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_007_000M1_scaffold_2240_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11281..12738)
-----------------
DNA (1458bp)
protein (486aa)
Xaa-His dipeptidase family protein {ECO:0000313|EMBL:KDS32017.1}; EC=3.4.13.20 {ECO:0000313|EMBL:KDS32017.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Aminoacyl-histidine dipeptidase n=3 Tax=Bacteroides vulgatus RepID=A6L2W7_BACV8
aminoacyl-histidine dipeptidase
L1_007_000M1_scaffold_2240_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12960..13187
-----------------
DNA (228bp)
protein (76aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L2W6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05958.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_2240_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13210..13824
-----------------
DNA (615bp)
protein (205aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L2W5_BACV8
hypothetical protein
Outer membrane family protein {ECO:0000313|EMBL:KDS55625.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_2240_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13943..14239
-----------------
DNA (297bp)
protein (99aa)
Thioredoxin n=2 Tax=Bacteroides vulgatus RepID=A6L2W4_BACV8
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ABR40028.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_2240_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14243..14701
-----------------
DNA (459bp)
protein (153aa)
Thioredoxin n=4 Tax=Bacteroides RepID=A6L2W3_BACV8
thioredoxin
Thioredoxin {ECO:0000313|EMBL:EIY81922.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_2240_13
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14805..15356)
-----------------
DNA (552bp)
protein (184aa)
Rubredoxin n=15 Tax=Bacteroides RepID=C3Q1E1_9BACE
rubrerythrin
Rubredoxin {ECO:0000313|EMBL:EEO61390.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L1_007_000M1_scaffold_2240_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15434..15844)
-----------------
DNA (411bp)
protein (137aa)
Transcriptional regulator, involved in iron uptake n=7 Tax=Bacteroides RepID=A6L2W1_BACV8
transcriptional regulator, involved in iron uptake
Uncharacterized protein {ECO:0000313|EMBL:EIY81924.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_2240_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15970..17934
-----------------
DNA (1965bp)
protein (655aa)
NAD+ synthetase {ECO:0000313|EMBL:EFG16307.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EFG16307.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
nadE; NAD synthetase (EC:6.3.1.5)
NAD+ synthase n=2 Tax=Bacteroides RepID=C6Z466_9BACE
L1_007_000M1_scaffold_2240_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18024..19142)
-----------------
DNA (1119bp)
protein (373aa)
imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19)
Histidine biosynthesis bifunctional protein HisB n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2V9_BACV8
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_2240_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19146..20186)
-----------------
DNA (1041bp)
protein (347aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Histidinol-phosphate aminotransferase n=6 Tax=Bacteroides RepID=HIS8_BACV8
histidinol-phosphate aminotransferase
L1_007_000M1_scaffold_2240_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20189..21469)
-----------------
DNA (1281bp)
protein (427aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Histidinol dehydrogenase n=5 Tax=Bacteroides RepID=A6L2V7_BACV8
hisD; histidinol dehydrogenase
L1_007_000M1_scaffold_2240_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21519..22370)
-----------------
DNA (852bp)
protein (284aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
ATP phosphoribosyltransferase n=9 Tax=root RepID=HIS1_BACV8
L1_007_000M1_scaffold_2240_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22599..23090)
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L2V5_BACV8
hypothetical protein
Thioesterase superfamily protein {ECO:0000313|EMBL:KDS32029.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_2240_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23101..23400)
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L2V4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05946.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_2240_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23506..24117
-----------------
DNA (612bp)
protein (204aa)
uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007538};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Uridine kinase n=4 Tax=Bacteroides RepID=A6L2V3_BACV8
L1_007_000M1_scaffold_2240_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24114..25493
-----------------
DNA (1380bp)
protein (460aa)
Glycoside hydrolase family 23 n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2V2_BACV8
glycoside hydrolase
Glycoside hydrolase family 23 {ECO:0000313|EMBL:ABR40016.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_2240_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25765..26019
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A6L2V1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40015.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_2240_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26392..26559)
-----------------
DNA (168bp)
protein (56aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P404_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS05938.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Protein of unknown function (DUF1703)/Predicted AAA-ATPase
Displaying 25 items

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