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L1_007_000M1_scaffold_2385

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2385_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(367..780)
DNA (414bp) protein (138aa)
Secondary thiamine-phosphate synthase enzyme n=4 Tax=Bacteroides RepID=C6Z6S7_9BACE
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:EIY76349.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000M1_scaffold_2385_2
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(789..1991)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L6A7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18901.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000M1_scaffold_2385_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1988..2632)
DNA (645bp) protein (215aa)
ABC transporter ATP-binding protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L6A8_BACV8
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ABR41222.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000M1_scaffold_2385_4
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2629..4161)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z6T0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16589.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L1_007_000M1_scaffold_2385_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4166..4867)
DNA (702bp) protein (234aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Ribosomal RNA small subunit methyltransferase E n=7 Tax=Bacteroides RepID=A6L6B0_BACV8
16S ribosomal RNA methyltransferase RsmE
L1_007_000M1_scaffold_2385_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4896..5462)
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Bacteroides vulgatus RepID=A6L6B1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY76354.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000M1_scaffold_2385_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5521..6798)
DNA (1278bp) protein (426aa)
Nucleoside permease NupG n=5 Tax=Bacteroides RepID=C6Z6T3_9BACE
Nucleoside permease NupG {ECO:0000313|EMBL:EET16592.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
xanthosine permease
L1_007_000M1_scaffold_2385_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7000..7614)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9U2I8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY76356.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000M1_scaffold_2385_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7636..8202)
DNA (567bp) protein (189aa)
Uncharacterized protein n=6 Tax=root RepID=A6L6B4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56113.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_2385_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8193..8663)
DNA (471bp) protein (157aa)
Sigma-70 region 2 n=4 Tax=Bacteroides RepID=D4V471_BACVU
Sigma-70 region 2 {ECO:0000313|EMBL:CDF18909.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
RNA polymerase ECF-type sigma factor
L1_007_000M1_scaffold_2385_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8765..8911
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HL23_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04629.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_2385_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8850..9983)
DNA (1134bp) protein (378aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Aldose 1-epimerase n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IRU2_BACVU
aldose epimerase
L1_007_000M1_scaffold_2385_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10615..11160
DNA (546bp) protein (182aa)
Sigma-70 region 2 n=6 Tax=Bacteroides RepID=C6Z6T9_9BACE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EIY76360.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
RNA polymerase ECF-type sigma factor
L1_007_000M1_scaffold_2385_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11157..12395
DNA (1239bp) protein (413aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z6U0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16599.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
RNA polymerase ECF-type sigma factor
L1_007_000M1_scaffold_2385_15
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12451..13239
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3Q5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18913.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
3-demethylubiquinone-9 3-methyltransferase
L1_007_000M1_scaffold_2385_16
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13719..14900)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6C0_BACV8
hypothetical protein
Putative 23S rRNA m5C1962 methyltransferase {ECO:0000313|EMBL:EET16601.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L1_007_000M1_scaffold_2385_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14890..15540)
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9IRU6_BACVU
3'-5' exonuclease family protein {ECO:0000313|EMBL:KDS56122.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_2385_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15537..16100)
DNA (564bp) protein (188aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6C2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04636.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000M1_scaffold_2385_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16255..18618
DNA (2364bp) protein (788aa)
FtsK/SpoIIIE family cell division protein n=5 Tax=Bacteroides RepID=A6L6C3_BACV8
FtsK/SpoIIIE family cell division protein
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:KDS56124.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000M1_scaffold_2385_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18635..19249
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZN07_BACVU
Outer membrane lipocarrier LolA family protein {ECO:0000313|EMBL:KDS56125.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000M1_scaffold_2385_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19339..20193
DNA (855bp) protein (285aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Thioredoxin reductase n=9 Tax=Bacteroides RepID=A6L6C5_BACV8
thioredoxin reductase
L1_007_000M1_scaffold_2385_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20224..23043
DNA (2820bp) protein (940aa)
Putative zinc protease n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L6C6_BACV8
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:KDS56127.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
zinc protease
L1_007_000M1_scaffold_2385_23
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23053..24540
DNA (1488bp) protein (496aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZLH1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF18921.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L1_007_000M1_scaffold_2385_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24553..25260
DNA (708bp) protein (236aa)
ATP-binding protein n=3 Tax=Bacteroides vulgatus RepID=A6L6C8_BACV8
ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFG19353.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_007_000M1_scaffold_2385_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25257..25769
DNA (513bp) protein (171aa)
Lipoprotein n=2 Tax=Bacteroides RepID=E5UTG4_9BACE
Lipoprotein {ECO:0000313|EMBL:CDF18923.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L1_007_000M1_scaffold_2385_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25825..27894
DNA (2070bp) protein (690aa)
HAD hydrolase family IA n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NZL9_9BACE
Putative haloacid dehalogenase-like hydrolase domain protein {ECO:0000313|EMBL:KDS32752.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
HPr(Ser) phosphatase
L1_007_000M1_scaffold_2385_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


28108..28425
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=12 Tax=Bacteroides RepID=RL21_BACV8
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000M1_scaffold_2385_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


28447..28710
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=7 Tax=Bacteroides RepID=RL27_BACV8
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Displaying 28 items

View Taxonomy